| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1489 |
|---|
| Symbol | |
|---|
| ID | 5104736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1455524 |
|---|
| End bp | 1456132 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640507377 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001191570 |
|---|
| Protein GI | 146304254 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGA CAATCCAGGG AGTATATGTA AACCCTCAGC AAATTGCCTA TCAGTTAGAG
AACTGGTTTA GGTCCAAGAA ACACTATCAG ACTCAGGTTC TAGGGATGGG CGCAAGCTAC
GTGGTTCAGG CCAAGAAAGT TGGTTTTCTG AGAACGATAT TCGGCGCGGA TAGGGCCTTC
ACTGTGAGGC TAATGGGCGG TCAAGGTTTT CTCAATGTGG ACGTGGGATT AGCTGACTGG
TTAAAGGCGG CGGATGTGAC GGAGGATGTT ATAGCTGCAC TTGTATTCAC TCCGCTCGCA
GTAGTGGAGG GAATAGAGGA GCTGTACGAC CTAAAGCTGG AGAAGGATAT CATAAAGGAG
GTTGAGAATT TGGCATATTC CATGTCCCAG GGATCTGGGA GTCCCATGTA TCAGCCCTAT
TCTCAGCCAA ACCCATATCA ATATCCGCAA CAGAATCAGC CTTCACAGTA TCCTCAACCC
TACCCATATC AAGCTCAGCC TCCTAACCAG CCGTCGTATC AACCTCAACA GAAGTACTGT
CCATCTTGCG GAACGCCCAA TCCTGGCACG GCTAGATATT GTATGAGCTG TGGAACTCAG
CTATTCTAA
|
|---|
| Protein sequence | MQKTIQGVYV NPQQIAYQLE NWFRSKKHYQ TQVLGMGASY VVQAKKVGFL RTIFGADRAF
TVRLMGGQGF LNVDVGLADW LKAADVTEDV IAALVFTPLA VVEGIEELYD LKLEKDIIKE
VENLAYSMSQ GSGSPMYQPY SQPNPYQYPQ QNQPSQYPQP YPYQAQPPNQ PSYQPQQKYC
PSCGTPNPGT ARYCMSCGTQ LF
|
|---|
| |