| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1484 |
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| Symbol | |
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| ID | 5104731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1451562 |
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| End bp | 1452818 |
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| Gene Length | 1257 bp |
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| Protein Length | 418 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507372 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191565 |
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| Protein GI | 146304249 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.555419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCTA TTCAAGACCT CATCGAGTTT GCCAGGATAG ACACGACCTC GGCCAAGGGG
AAAGGAGAGG AGGGCGCGAA GTTCATAAGA GATTACATGC AGGAGCACGG AATCGAGGCA
AGGATAATCA GGCACAGATC TAAGAATCCC TATGTCTATG GGGAGATCAA CGTTGGGGCC
ACTAAGACAT TGCTAATCTA TAACCATTAC GATGTACAGC CGGCTGAGCC ACTCGATAAG
TGGAACAGCG ATCCCTTCGA TCCCGTGATT AAGGACGGTA AGCTAGTGGG AAGAGGGGTT
GGAGATGATA AGGGCTCGCT CATGGCTAGA CTGCAAGCGT TGATCGAGAT GGGGAAGCCT
CCGATGAATA TTAAGTTCAT TTATGAGGGG GAAGAGGAGA TAGGTAGTCC CAACATAGAC
TTATTTCTAG CAGAGCACAG GGAATTACTA GCCTCAGATT ACGTTCTCTG GGAAGGTGCA
GGAAGGGGAT CCAGTGGCGC ACCCACCATA GTCCTTGGAG TAAAGGGCCT ACTATACGTT
GAAATCTCGG TAAGAACACA AAAGGACCTT CACTCCATGT ATGCCCCTGT GGCCAAGAAC
CCGGCCTGGG AGTTAGTTTA CTTGCTGTCT TCCCTAAAGA GTGGTGGTAG GGTTAACCTT
CCTGGTTTCT ATGACAAGGT CAAATGGCTC ACGGAAGAGG AAAGGAGATA TCTTAAGGGA
AATAAGAGGT CCATGGAGGA CGCACTGGGA CAGGAACTCC CAGACGATTT TCAGAGGAGA
CTAGTGGAGG AACCTACGTG TAACATTGCG GGACTATACT CGGGATACAC AGGTGAGGGA
TCTAAGACGG TGATTCCATC CTATGCCATG GCAAAACTGG ACTTTAGACT TGTACCAGAC
CAGGACCCTG ACGAAATCCT GAAGATACTT CAGGACCATC TAAAGGGAGT GGATATCAAG
GTCTGGGGTA AGGTAAGGCC CTATAGGACC TCAATCAATA GTAAGATTGC TAAATCGCTG
ATGGATTCCG CCAAGAAGGT ATATGGTGTT GATCCTGAGG TCATACCCAA CAGTTACGGT
ACTGGGCCCA TGGAGTCCTT CGCAAGGATT TTGCAGAATA ATCAAATAGC CGATGGAGTT
GGAGTGGAGC ATCCGGGCTC AAATATTCAT TCCTTTAACG AGAACATATA CGTAGATGAT
TATATGAAGG CTAAGGAGTG GATGAAGAGT TTCGTGAGGC ACTTAGCTCA GCCTTAG
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| Protein sequence | MNSIQDLIEF ARIDTTSAKG KGEEGAKFIR DYMQEHGIEA RIIRHRSKNP YVYGEINVGA
TKTLLIYNHY DVQPAEPLDK WNSDPFDPVI KDGKLVGRGV GDDKGSLMAR LQALIEMGKP
PMNIKFIYEG EEEIGSPNID LFLAEHRELL ASDYVLWEGA GRGSSGAPTI VLGVKGLLYV
EISVRTQKDL HSMYAPVAKN PAWELVYLLS SLKSGGRVNL PGFYDKVKWL TEEERRYLKG
NKRSMEDALG QELPDDFQRR LVEEPTCNIA GLYSGYTGEG SKTVIPSYAM AKLDFRLVPD
QDPDEILKIL QDHLKGVDIK VWGKVRPYRT SINSKIAKSL MDSAKKVYGV DPEVIPNSYG
TGPMESFARI LQNNQIADGV GVEHPGSNIH SFNENIYVDD YMKAKEWMKS FVRHLAQP
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