Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1481 |
Symbol | |
ID | 5104728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1449993 |
End bp | 1450439 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640507369 |
Product | glycine cleavage system protein H |
Protein accession | YP_001191562 |
Protein GI | 146304246 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0509] Glycine cleavage system H protein (lipoate-binding) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.14622 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGTGG AATCGAATTG TGAGATTCCG GAAAACCTTC TATATTACAT CGATGGGAAA AACACCGTGT GGGCTAAGCA GGAATCTGCT GATACCATTC TTGTCGGGAT AACTGACATA GCCCAAACCA TGGCCGGTAA GGTAGTAAAG GTCAGAATAA AGAAAAAGGG TACTAAGGTC GAGAAGGGAA AGCCAGTCGC TACCATGGAG AGCGGTAAGT GGGCAGGTCC AGTTCCAGCT CCTGTTTCAG GTGAAATTGT TGATGTCAAC GGGGAAGTGG AGAAGAGCCC AGTCCTAGTG AACAGAGACC CCTACGGAAA CGGTTGGCTT GTTAGGATGA AGGTGGCTAA CCCAGAGGAG TTGAAACAGC TCTACACTGG GACACAAGCA GTTCAAAAAC TAAAGGAGCT CGTTGCAGCG GAGAAAATAT CCTGCAAGAG GCTGTGA
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Protein sequence | MVVESNCEIP ENLLYYIDGK NTVWAKQESA DTILVGITDI AQTMAGKVVK VRIKKKGTKV EKGKPVATME SGKWAGPVPA PVSGEIVDVN GEVEKSPVLV NRDPYGNGWL VRMKVANPEE LKQLYTGTQA VQKLKELVAA EKISCKRL
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