Gene Msed_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1481 
Symbol 
ID5104728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1449993 
End bp1450439 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content48% 
IMG OID640507369 
Productglycine cleavage system protein H 
Protein accessionYP_001191562 
Protein GI146304246 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.14622 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCGTGG AATCGAATTG TGAGATTCCG GAAAACCTTC TATATTACAT CGATGGGAAA 
AACACCGTGT GGGCTAAGCA GGAATCTGCT GATACCATTC TTGTCGGGAT AACTGACATA
GCCCAAACCA TGGCCGGTAA GGTAGTAAAG GTCAGAATAA AGAAAAAGGG TACTAAGGTC
GAGAAGGGAA AGCCAGTCGC TACCATGGAG AGCGGTAAGT GGGCAGGTCC AGTTCCAGCT
CCTGTTTCAG GTGAAATTGT TGATGTCAAC GGGGAAGTGG AGAAGAGCCC AGTCCTAGTG
AACAGAGACC CCTACGGAAA CGGTTGGCTT GTTAGGATGA AGGTGGCTAA CCCAGAGGAG
TTGAAACAGC TCTACACTGG GACACAAGCA GTTCAAAAAC TAAAGGAGCT CGTTGCAGCG
GAGAAAATAT CCTGCAAGAG GCTGTGA
 
Protein sequence
MVVESNCEIP ENLLYYIDGK NTVWAKQESA DTILVGITDI AQTMAGKVVK VRIKKKGTKV 
EKGKPVATME SGKWAGPVPA PVSGEIVDVN GEVEKSPVLV NRDPYGNGWL VRMKVANPEE
LKQLYTGTQA VQKLKELVAA EKISCKRL