Gene Msed_1474 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1474 
Symbol 
ID5104721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1445527 
End bp1445913 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content46% 
IMG OID640507362 
Productsignal transduction protein 
Protein accessionYP_001191555 
Protein GI146304239 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGAG TTAAGGACAT AATGAGCTCT CCAGTGTTTC AGGTTGAGGC AAATACAACG 
CTTCAGGAGA CCTGTAAACT AATGCTGGAG AAAGGAGTAG GCTCCGTGAT CGTGACAGAT
AACGGCGAAC CAAAGGGAAT ATTCACAGAT AGGGATGCAG TAAGGGCGAT AGCCAATGGT
GCCTCCGCGA TGGATGAATT GAGGACCGTG GCAACAATGC ATGACCTTGT TACGGTGAAC
GAGGAAGTTG ACATTATACA GGCTGCGAAG CTGATGGCTG AAAAGAAAAT CAGACATTTG
CCAGTTACCA ACAGTAACGG TGAGATTGTC GGCATGATTT CGGTTACTGA CCTTTCGGCA
GAATTAAAGG AAATGCAAGC GCAATAG
 
Protein sequence
MKRVKDIMSS PVFQVEANTT LQETCKLMLE KGVGSVIVTD NGEPKGIFTD RDAVRAIANG 
ASAMDELRTV ATMHDLVTVN EEVDIIQAAK LMAEKKIRHL PVTNSNGEIV GMISVTDLSA
ELKEMQAQ