Gene Msed_1469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1469 
Symbol 
ID5104716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1442060 
End bp1442968 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content49% 
IMG OID640507357 
ProducttRNA (guanine-N1-)-methyltransferase 
Protein accessionYP_001191550 
Protein GI146304234 
COG category[S] Function unknown 
COG ID[COG2419] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCTTG GACGAGCCTT AGGTAAGCAA CTGCAGGAAT CTGGGATAGA TACTCTATAC 
GTTAGGGGTT TGAGAAGGCC ATTTCTTCAG CATACCGCTC TAAAACTGGT CCTTTACAAC
TGGGGAATAA GGCGCGGAAT TTTTTACGGA AGAAAGATAG TTGAGGAATA CGGTATCTCT
TTCCTGGGGG GAAAGGGGAC TGAAATTGCC ACAGACACGC CCCATCCACA GGGAGATAAG
TTCACCTTCC AGTTTCCAAG CTCCCCGCTG TTTGTGATAG ACTTCTCGCT TTGGGATAGG
CACTCTCAAG ACGAAAAGAG AAAGTTGGTG AGCCAGGTCC TTATGATAAT CTCCACTCTC
AGAAAGTATC TTTGGGATTA CAACCTCTCC CTAAATCACA CCACGCAGGA ATTGGAGGAA
ATGCTCATGG AGGTTTCCTT CTTTAACAAG GTGAGAAGAA ACGTTGAACC CTTTAACGCG
GTAGTGCTAG ATCCCTATGC TGAGAGGGAG GCGACCGAGG ATATCCTGAG GAGTGCAGAT
ACATTCATCT TGGGAGGAAT TGTGGACGAC TCTGGATGGA AATATGCTAC GCGAGAGTTG
ACGGAGATTG CAGGATATCA CCAACCTAGG GTGAAGATCG TACTCCGCGG ATCCAGGGTT
GGGGTTCCAG ATAGGTTAAA CAGGATAGTC TCCATAGTAC TTAGGGTGAG GGAAGGCCAA
AGTCTAGAGG AAAGCATACT GGCTGAGCAG TCGAACGCGG ACAAGTTCGC TCGACTTCTG
CGTGACACCA CCCTAAACGG GGACTTGGAG GGAAACGCCC AGTGGCTCAG GGCTGGAGAC
AAGCTTAGGG AGAGAGTCAA AAAGATCATT AGTCGAACTC AGCCTGGATC TTCTTCTTCC
CCTCGATAA
 
Protein sequence
MILGRALGKQ LQESGIDTLY VRGLRRPFLQ HTALKLVLYN WGIRRGIFYG RKIVEEYGIS 
FLGGKGTEIA TDTPHPQGDK FTFQFPSSPL FVIDFSLWDR HSQDEKRKLV SQVLMIISTL
RKYLWDYNLS LNHTTQELEE MLMEVSFFNK VRRNVEPFNA VVLDPYAERE ATEDILRSAD
TFILGGIVDD SGWKYATREL TEIAGYHQPR VKIVLRGSRV GVPDRLNRIV SIVLRVREGQ
SLEESILAEQ SNADKFARLL RDTTLNGDLE GNAQWLRAGD KLRERVKKII SRTQPGSSSS
PR