| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1465 |
|---|
| Symbol | |
|---|
| ID | 5104712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1436952 |
|---|
| End bp | 1437830 |
|---|
| Gene Length | 879 bp |
|---|
| Protein Length | 292 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640507353 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001191546 |
|---|
| Protein GI | 146304230 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0247] Fe-S oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAGCC TTAGATCCTT TCTCAAGCAA AGCCTGGATA AGTATGGAAT GCCCTTCCCC
GTGGACAAGA GAGTTTGTTC AGGCTGGGCC AGAGACCTTC CACACGGTGG GGAGACCATA
ATTTTCACGT CATGTATGTA TCAGATTGAA CCAGTAGTCC CTACGTTAAG TAAATTTTCT
TCCATGGCGG GTGCCCTCAC CGGGGCCCTC AAGGGACTCT CATCCTTCGC AAAGCTTGTT
AAACCTCCCA AGGAGGAGAT GGAGAGGGCG TACACGATCT TAAACAATAT CGTGAATGCC
CTCAGGAGAA GGGGAATCAA CCCTGGGTAC CTGTACGAGG ATGAGCCCTA TAGTGGCGCC
CTCCTGTTGG AGTCAGGTCT GCTCGAGGAT TTCGCAGATC ACGCAAGAAA GGTGGCGTCG
ATGCTGAAGG AAAGGGGGGT AAAGAGAGTC ATCACTGTTG ATCCCCACAC GCACAACGCC
TTGACCAGAT ATGGCGAGTT CATCCCCTTT GATGTAGAGG TCGTGAACTA TCTCCAGCTA
GTGGATGTGG ATAGGAAAAT AGATGGAGAG TTCACGATCC ACGACTCATG CCTCTACTCT
AGGTTCCTGA ACCTTAGGGA TAGGTATAGG GAGCTCATGT CTAAGTCCGG GATCAAGTTA
AACGAAGACT TCCTTGTAAC TGGGAGGGAG ACCTCCACGT GCTGTGGTGG TCCCATAGCG
CTAATCAACA GGGATCTAAG TGAATCCATA GCGGAGAAGA GAGCTCAGGA CCTGAACAGA
CTGTCTAACA AGCTCCTGGT TATGTGTCCA ATCTGTTACG TTACACTCTC ACCTCACTTT
AAGGGAGAGG TAAAGGACCT TGCTGAGGTG ATACTATGA
|
|---|
| Protein sequence | MESLRSFLKQ SLDKYGMPFP VDKRVCSGWA RDLPHGGETI IFTSCMYQIE PVVPTLSKFS
SMAGALTGAL KGLSSFAKLV KPPKEEMERA YTILNNIVNA LRRRGINPGY LYEDEPYSGA
LLLESGLLED FADHARKVAS MLKERGVKRV ITVDPHTHNA LTRYGEFIPF DVEVVNYLQL
VDVDRKIDGE FTIHDSCLYS RFLNLRDRYR ELMSKSGIKL NEDFLVTGRE TSTCCGGPIA
LINRDLSESI AEKRAQDLNR LSNKLLVMCP ICYVTLSPHF KGEVKDLAEV IL
|
|---|
| |