Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1458 |
Symbol | |
ID | 5104828 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1428620 |
End bp | 1429411 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640507346 |
Product | aldose 1-epimerase |
Protein accession | YP_001191539 |
Protein GI | 146304223 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGTAA GGATATCTTC GGGAGAGTTG GAGGCAATAA TTGACCAGAG GGGGGCATAC CTTACATCCT TCAAGATGAA GGGAAAGAAC GTGATCACTG AGGGCCAGGA AAGACAAACT AGGGGAGGAA TGGCGATACT TCTTCCGTTT GCCAACAGAG TTAAGGGGGG CAGATATGAG TGGAAGGGAA GAGTTTACAA CCTTCCGCTG AACAGGGAGG GAAATGCCAT TCACGGTTTA GTAATGGACA AGACGTTTCA GATCCTCTTC AGGGATGACA GGGAAGTGAG ACTGGGCACG GAACTCCGGG ATCAGGGCTA TCCCTCCAGG TTAAACGTGG AGGTGAACTA TTCTCTGAGG AGCGAGTTAA GGTGTACAAT CTCAGTGAAA AATGAGGGAG ATGAGGCTCC CCTAGTCGTG GGGACACATC CATACTTCAT CGTGAAGGGG GACTGGAGGA TCTCACCTAG TAAAGGCAAG AGATGCGTCA TGAGGGAGAA GATACCTACG GGAGAGATGA TAGATTTCAA CATCACGCAA GGAGATTACG ACGACTGCTT CTATTTACCG GGAGATGTGA TCCTTTCGTC CAATTACTCG AGGGTGAAGA TCTCCAAGCC TGGAATGGAT TTCGTTCAAC TATACACTGG AATTCCTGGT GCAGTCGCCG TTGAACCCAT GAGTGGAGCC CCCAACGCCT TCAATAACGG GATAGGCCTA ATTACCCTGG CCAGTGGAGA GAGAAGGGAG TTTGAGATTG AAATACAGGT CTCCCTCGTG GAGGAAGGCT AA
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Protein sequence | MQVRISSGEL EAIIDQRGAY LTSFKMKGKN VITEGQERQT RGGMAILLPF ANRVKGGRYE WKGRVYNLPL NREGNAIHGL VMDKTFQILF RDDREVRLGT ELRDQGYPSR LNVEVNYSLR SELRCTISVK NEGDEAPLVV GTHPYFIVKG DWRISPSKGK RCVMREKIPT GEMIDFNITQ GDYDDCFYLP GDVILSSNYS RVKISKPGMD FVQLYTGIPG AVAVEPMSGA PNAFNNGIGL ITLASGERRE FEIEIQVSLV EEG
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