Gene Msed_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1458 
Symbol 
ID5104828 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1428620 
End bp1429411 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content50% 
IMG OID640507346 
Productaldose 1-epimerase 
Protein accessionYP_001191539 
Protein GI146304223 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2017] Galactose mutarotase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGTAA GGATATCTTC GGGAGAGTTG GAGGCAATAA TTGACCAGAG GGGGGCATAC 
CTTACATCCT TCAAGATGAA GGGAAAGAAC GTGATCACTG AGGGCCAGGA AAGACAAACT
AGGGGAGGAA TGGCGATACT TCTTCCGTTT GCCAACAGAG TTAAGGGGGG CAGATATGAG
TGGAAGGGAA GAGTTTACAA CCTTCCGCTG AACAGGGAGG GAAATGCCAT TCACGGTTTA
GTAATGGACA AGACGTTTCA GATCCTCTTC AGGGATGACA GGGAAGTGAG ACTGGGCACG
GAACTCCGGG ATCAGGGCTA TCCCTCCAGG TTAAACGTGG AGGTGAACTA TTCTCTGAGG
AGCGAGTTAA GGTGTACAAT CTCAGTGAAA AATGAGGGAG ATGAGGCTCC CCTAGTCGTG
GGGACACATC CATACTTCAT CGTGAAGGGG GACTGGAGGA TCTCACCTAG TAAAGGCAAG
AGATGCGTCA TGAGGGAGAA GATACCTACG GGAGAGATGA TAGATTTCAA CATCACGCAA
GGAGATTACG ACGACTGCTT CTATTTACCG GGAGATGTGA TCCTTTCGTC CAATTACTCG
AGGGTGAAGA TCTCCAAGCC TGGAATGGAT TTCGTTCAAC TATACACTGG AATTCCTGGT
GCAGTCGCCG TTGAACCCAT GAGTGGAGCC CCCAACGCCT TCAATAACGG GATAGGCCTA
ATTACCCTGG CCAGTGGAGA GAGAAGGGAG TTTGAGATTG AAATACAGGT CTCCCTCGTG
GAGGAAGGCT AA
 
Protein sequence
MQVRISSGEL EAIIDQRGAY LTSFKMKGKN VITEGQERQT RGGMAILLPF ANRVKGGRYE 
WKGRVYNLPL NREGNAIHGL VMDKTFQILF RDDREVRLGT ELRDQGYPSR LNVEVNYSLR
SELRCTISVK NEGDEAPLVV GTHPYFIVKG DWRISPSKGK RCVMREKIPT GEMIDFNITQ
GDYDDCFYLP GDVILSSNYS RVKISKPGMD FVQLYTGIPG AVAVEPMSGA PNAFNNGIGL
ITLASGERRE FEIEIQVSLV EEG