| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1444 |
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| Symbol | |
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| ID | 5104814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1411502 |
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| End bp | 1413190 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507332 |
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| Product | DNA polymerase B region |
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| Protein accession | YP_001191525 |
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| Protein GI | 146304209 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGTT ACGTAATAGA TGCCGTACCA TACAGGGGTA GAATAAAGAT CGTGCTGGAC
TCCTTCAGAG AAGCGTGGAT TAAGACAACC TATCCCATTT ACGTCATCAC CGATAGACCT
GACCTCGTGA TGCAACATCC CTCGGTGGTG TCCCACGAAG AGGAGGAGTG GAGAACCCTA
TCTGGCGAAA GGATTACCTT ACACAGGTAT GAGCTCCTTG ACCTTGAGGC GAGGTCCTAT
ATTTCTAGGA GAACGACCGT GGTGAACCAG CTTCCCACCA CACTTTCCCT TGTCCTGGAC
AGGTTAGATG CTAGACCCTT CAGAAGGGTC AGGATAGACG AAGGTAAAGT CCTCGAATTC
TGGGATCTGG GCCTATCCTT TCCGCCCGTG AAATATGCCA CGGTGATAAC ACATGACTGG
TATGGCCCTT CAGAGACGGG GAACATGTTT GAGGCTGACG TGAACGGAGA GAAGTGGAGG
GGGTTACTGA GAGACCTGGA CCTCGAGGTA GACGTCGCTG GCTGTTTCGG ACGTGCGTGC
GACCACGTGA AGGCGCCAGT TAAGATAAAA CTTGAACAAA AGAGGTCTCC GGTCTCCATT
AAGGGGTTAA TTGAGTGGTC CTACACCTGC AAGACACCCG TAAGGGAATT GGTGGACGCT
ACCATAGGGA AAGCGCTGAC CACAAACGAG GCCTGGGTCG CATTCGAGAA GAAAATAGTT
GTTCCCAACA AGGTCCCGAG GGTAGAGAAG CTCAGGGATA TGGATGAACT GCTCCTCAAC
GATAAGGGTG GACTGGTCCT GTTTCCTAGA ACCGGTTGCT TCGACGATGC CTGGCAAGTT
GACTTCTCCT CTATGTATCC TTCTCTCATA GTTAAGCATA ACATCTCCGG GGAAACCGTT
GACGCCTGCG ATGACGTAGT CACAGAGATA GGCCATACCA TCTGCAATAG CGAGAGGGGG
ATAGTACCGG AGGCGCTATC CTGGTTAATA AGAAGGAAAG AGGCCCTAAA GCCCGTGGAC
CCTGAAAGGG CAGAGGCGAT AAAATGGATA CTTGTTGCCT CCTTTGGGTA TCTAGGATAC
AGGAACTCTA AGTTTGGGAA GATTGAGGCA TATGAACTGG TGACCTACTA CGCGAGGAAG
ACATTGAGGA GAGCCTTGGA AATTGCGCAG GAAATTGGGG TTGAAGTGCT TCACGGGATA
GTGGACTCCC TCGTGATTAG GGGGGATGCT CCACAGCTAG TGAGGAGACT GGAGGAGGAG
ACTGGGTTAC ACCTTCGCTC CACCAGGCTA AAGTGGATAG TTCTTGGGGG GAGAAGGGAT
GGACTTCCTT ACCCTATGAG GTACTTTGGA ATGACGGAGG AAGGAATGAA ATACAAAGGA
ATCATCAGGA GAAACATGCC GAACCTAGTA AGGGATTTCC TCGAGAGCTC CATGAACATC
CTTTCCAGGG CGGAGACGTG TGAGGACCTG AAAAGGCTTA GGTCAAACCT ACTCGAGAAC
CTCAGGGAGT ATGAAGAGAG GGTAATTCAT GGGGAGCCCA GGGACTTCGT TATGTGGGTG
AAGGGAGAGC CATACGTGAG GGGAGTGAGG GGGTTCTACA ACGCAAGGAG AGGGTTCATG
GGGAGGGATA CGAAGTACTA TCTGGAATAT CTTAGGAGAA CGGCGAGGGA GGTCCTGGGA
ATTGGATGA
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| Protein sequence | MEGYVIDAVP YRGRIKIVLD SFREAWIKTT YPIYVITDRP DLVMQHPSVV SHEEEEWRTL
SGERITLHRY ELLDLEARSY ISRRTTVVNQ LPTTLSLVLD RLDARPFRRV RIDEGKVLEF
WDLGLSFPPV KYATVITHDW YGPSETGNMF EADVNGEKWR GLLRDLDLEV DVAGCFGRAC
DHVKAPVKIK LEQKRSPVSI KGLIEWSYTC KTPVRELVDA TIGKALTTNE AWVAFEKKIV
VPNKVPRVEK LRDMDELLLN DKGGLVLFPR TGCFDDAWQV DFSSMYPSLI VKHNISGETV
DACDDVVTEI GHTICNSERG IVPEALSWLI RRKEALKPVD PERAEAIKWI LVASFGYLGY
RNSKFGKIEA YELVTYYARK TLRRALEIAQ EIGVEVLHGI VDSLVIRGDA PQLVRRLEEE
TGLHLRSTRL KWIVLGGRRD GLPYPMRYFG MTEEGMKYKG IIRRNMPNLV RDFLESSMNI
LSRAETCEDL KRLRSNLLEN LREYEERVIH GEPRDFVMWV KGEPYVRGVR GFYNARRGFM
GRDTKYYLEY LRRTAREVLG IG
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