Gene Msed_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1442 
Symbol 
ID5104812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1409745 
End bp1410275 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content44% 
IMG OID640507330 
Productmethyltransferase type 11 
Protein accessionYP_001191523 
Protein GI146304207 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0423534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCATC ATTTTAGGAG GCTTTTAGAT CCAGAAAGGA AGAAATTTGA GGACCCAGAG 
AAGTTTGTTC CGTCATTACT TCATGGAAAT GAAGTAGTAG TGGATATGGG ATGCGGTCCA
GGATATTACT GTCCAGTACT TGAGGAACAC TCCCTTAAGT TGTACTGTAT TGATCTAAGT
AAGGAGGCAC TCGATATAGC TAAAACTAGG GTGAAGAAAA GCTCCACCGT TTTTCTCAAC
GAGCCATCGG AACATACTTC TCTTCCATCA TCATCAGTGG ATGTAGTGGT GTTCTCAAGC
TCCTTTCATG ACATGGACAG GGAGGGAGCC TACAAGGAAG TCATGAGGAT CCTTAAACCT
TGTGGTAGGG TAATAATCGT GGATTGGAGG AAAGATGCCC CCTTTGGACC ACCGGTTCAT
ATTAGGATGT CGCGTGAAGA TTACCTTGCC ACGTTCAAGG ATTTTCAGGT AGTGACAGAG
TTCTCTCCTG GCCACTATCA CTTTGGTCTT GTCCTGCAGA GAAAGTGTTA A
 
Protein sequence
MDHHFRRLLD PERKKFEDPE KFVPSLLHGN EVVVDMGCGP GYYCPVLEEH SLKLYCIDLS 
KEALDIAKTR VKKSSTVFLN EPSEHTSLPS SSVDVVVFSS SFHDMDREGA YKEVMRILKP
CGRVIIVDWR KDAPFGPPVH IRMSREDYLA TFKDFQVVTE FSPGHYHFGL VLQRKC