| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1430 |
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| Symbol | |
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| ID | 5104800 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1400430 |
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| End bp | 1401041 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507318 |
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| Product | NADH ubiquinone oxidoreductase, 20 kDa subunit |
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| Protein accession | YP_001191511 |
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| Protein GI | 146304195 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.936146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.696438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTGGT TTATAAAGGG AATTAGGATG GGTGTTAAGA CCGAGGACGA TTATCACCAC
GAAACTAAAT GGCCATCCAG GCTCACGAGA GTTAAAGGAG GAGAAATTAC CTGTCCCACT
GACGCCATAG GTGAGGAATG GAAACAGGAG AGATGCATTT TCTGCAGGGC ATGTGAACCC
GTATTCTCGC CAACAGGGGA GACCTTGACA CCTAGGGTTG AGAGGTCAGA TGTTACCTTC
AAAAGATCAT TCTATCTGTA TCCGTTAGAT GCTGGAAGCT GTGGCGGATG CAACCTAGAA
CTAAGGCTGA TTTCCTCTCC TCAGTATGAT ATGACTAGAT TTGGTATTTT CTTCACCAAT
ACCCCCAAGC ACGCCGACGC ACTACTAATT ATGGGGAATC TGGGCAAGAG AATGGAAGAG
GTTATAAGGA GAGCTTATGA TGTAATACCT TCCCCAAAGC TAGTGATTCT CTTGGGTACG
TGTGCCATAT CAGGTGGAGT GACCGGAATT CCACCAGACA TAAGGGGAGA CGTCATTGTT
CCAGGCTGTC CCCCAACCCC TGCCTCAATA CTTGATGCAT TGATAAAGGC CAAAGGAGGT
GATAGGAAGT GA
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| Protein sequence | MNWFIKGIRM GVKTEDDYHH ETKWPSRLTR VKGGEITCPT DAIGEEWKQE RCIFCRACEP
VFSPTGETLT PRVERSDVTF KRSFYLYPLD AGSCGGCNLE LRLISSPQYD MTRFGIFFTN
TPKHADALLI MGNLGKRMEE VIRRAYDVIP SPKLVILLGT CAISGGVTGI PPDIRGDVIV
PGCPPTPASI LDALIKAKGG DRK
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