| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1419 |
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| Symbol | |
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| ID | 5104790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1385892 |
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| End bp | 1387136 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507308 |
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| Product | nucleotidyl transferase |
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| Protein accession | YP_001191501 |
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| Protein GI | 146304185 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0198372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00414302 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATGGT CTCCTGAGGA TATAAAGGTT ATCATTCCCA TTGGGGGAGA AGCAACGAGA
ATGCGCCCTT TAACCGTGGA AACCTCGAAA GCGACCGTGA GGCTTCTGAA TAGACCCCTC
CTCGAGTTTC CGATTCTCGA GCTCGCAAAG CAGGGAGTAA AGGAGTTCAT TTTTGGCGTT
AAGGGGTACG TTAATTACAA GTCTCTCTTT GACACCTTCA AGGAGGGTAT AGGATTTTCA
GCTAGGTACA GGATTAAACC AAGGGTGCAC TTCAAGTATC AACCTAGAGT CGACAGCGTT
GGTAACGCGG ACTCCGTAAG GATCAACATG GACTATTACA GGATAGATGA CATCACGCTC
GTGATCCAGG GAGATAACCT GATCAAGCTG GACCTAAAGA AGCTAGTGGA CTATCACCTG
TCAAAGGGAG CGATAATGAC TATCGTGCTC AAGAAGTGGC ACGACGTGAG GGAATTCGGG
GTTGCGGACC TTGGGGAAGA CATGAAAATA AGGAAGTTCG TTGAGAAACC CAAGGAAGGA
GAGGCTCCAT CTAACCTGAT CAACACGGGA GTCTACGTCT TGTCTCCTAA GATAAGGGAT
ATCTTCGCGA GTGATGAGGT TTCGGCCATG AGAGAGGAGG GAAAGATGGA CTTTGGGAAG
GACATAATTC CCTGCCTAAT CCAGAAAGGC TACCCAGTTT ACGGTTACGT TACTGACTCT
CTCTGGTTTG ACGTCGGGAC TCCTGAGAGG TACTTGGAAG CCATGAGGGT ACTTCTAGAA
AGCCTGGACG AACATGAAAT GGGTGGGAAG AGGATAGACC AGTCCAAGAG GATATTTGTC
CAGGGAACGA GCCCTGACTC CATAAGGAGG AGAAACGTGA TAGCCATGAA GTATAGAAAG
GGTAGGATGA AAATAGAAGG GAGCGTGCTC ATAGGAAGGC ACTGCCAGAT CGGGAACAAC
GTTTACCTAG AGAACTCCAC GATTGACAAC TTCTCGATCC TAAGAAATAA CGTCAGGGTT
GTGAGGAGCT CCATCATGGA CAGGGCATTC ATTGGCGAAG GAGTAGTGAT AGAGAACTCG
GTCATAGCTA GACATGTGGA AATTAGGGGA GGGGCTAGGA TAATTGGGAG TGTCATAGGT
GACGATGTGG TGATAGATGC TGACACTGAG ATAGTGAACT CGAAGATATA TCCGCACAAA
GTTATTAACG CGAATAGTAA AATACACGAT ACTGTACTGA CTTAA
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| Protein sequence | MQWSPEDIKV IIPIGGEATR MRPLTVETSK ATVRLLNRPL LEFPILELAK QGVKEFIFGV
KGYVNYKSLF DTFKEGIGFS ARYRIKPRVH FKYQPRVDSV GNADSVRINM DYYRIDDITL
VIQGDNLIKL DLKKLVDYHL SKGAIMTIVL KKWHDVREFG VADLGEDMKI RKFVEKPKEG
EAPSNLINTG VYVLSPKIRD IFASDEVSAM REEGKMDFGK DIIPCLIQKG YPVYGYVTDS
LWFDVGTPER YLEAMRVLLE SLDEHEMGGK RIDQSKRIFV QGTSPDSIRR RNVIAMKYRK
GRMKIEGSVL IGRHCQIGNN VYLENSTIDN FSILRNNVRV VRSSIMDRAF IGEGVVIENS
VIARHVEIRG GARIIGSVIG DDVVIDADTE IVNSKIYPHK VINANSKIHD TVLT
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