Gene Msed_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1411 
Symbol 
ID5104621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1378486 
End bp1378929 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content48% 
IMG OID640507300 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_001191493 
Protein GI146304177 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1246] N-acetylglutamate synthase and related acetyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000201819 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000645315 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCCCTTGA CCATCAGGGA GGCCACTAGA GGCGATATAG AGGGGGTGTA CAGGTTATAC 
CAGTCGTTGA CTCCTGAGGA TCTCTATATG CGCTTTTTCT CGTTCCATAG GGTATCCCAC
GAGGAGATAG AGCAACTCTT CAGTAGACAG GATCACATCA CCTTGCTGGC AGAGATTGAT
GGGGAAATAG TCGGCGAGGC CACTCTCTAC GATGATGGTG AGTTCTCAGT TGCGGTGAAA
CCCAATCAGA GGAGAGGAGG AATAGGAACT GAATTGGTTG CAGAACTCAT AAGGAGGGCG
AAAAAGATGG GCATAAGTAA GGTCAAGTTC TACACCCTTC CAGAGAATTA CCCGATGATA
AGGATAGGCA AGAAACTAGG ATTTAAGCTG GAGTACGATG AAGATCAGGT CAAGGGGGTC
TTAGAACTAG GTCAAGGGTC TTAA
 
Protein sequence
MPLTIREATR GDIEGVYRLY QSLTPEDLYM RFFSFHRVSH EEIEQLFSRQ DHITLLAEID 
GEIVGEATLY DDGEFSVAVK PNQRRGGIGT ELVAELIRRA KKMGISKVKF YTLPENYPMI
RIGKKLGFKL EYDEDQVKGV LELGQGS