| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1399 |
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| Symbol | |
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| ID | 5104609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1370105 |
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| End bp | 1372087 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507288 |
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| Product | CoA-binding domain-containing protein |
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| Protein accession | YP_001191481 |
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| Protein GI | 146304165 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
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| TIGRFAM ID | [TIGR02717] acetyl coenzyme A synthetase (ADP forming), alpha domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.578078 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.000299945 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGCTAG ATTACCTCTT TAGGCCTAGA ACCATAGCGG TCGTAGGAGC TTCACGCAAC
AGGGAGAAAG TTGGAAACGT GATTTTTAGA AACGTCGCAT CTACTTTTCG CGGTAAGGTT
TATCCTGTCA ACAATAAATC AGAAACCATC GAGGGTGTCC AATCTTATAA GTCCTTGAAG
GATATACAAG ACGACGTTGA TCTTGCCATC ATTTCTGTGC CAAGGGAGTC AGTTCCAGGG
GTTATGGAAG AGGCTGGTGA GAAAGGCGTA AGGTCGGCCA TAGTTATCAC CTCCGGCTTT
AGGGAAGTAG GAGAGGAAGG AGAAAAGCTA GAGAGGGAAG TCGCATCAAT TGCTAACAAG
TATGGGATAA GGTTTCTTGG GCCAAATACC ATGGGTCTTC TAACTCCTGA TTATAACGGT
ACCTTCGCCT TCGCAGACGT TAAACGTGGA GAAATTGCCC TCGTGGTACA GAGCGGTGGA
ATAGGTGCTT ACATGCTTAA CTGGGCTCAG AAATCTAGGA CAGGTGTAAG TTTTCTCGTT
AGTCTAGGAA ACCAGACTGA CGTGAAGGAG TACGAGGTTA TAGATTATTT AGCGAAGGAC
CCTGAAACTA AGGCAATCTT TGTGTACATT GAGGGAGTAT CTGACGGAGA GAAGTTTCTC
AACGTGGTTC CAGAGGCCAC ATCCAGGAAA CCGGTCATCT TCATCAAAGG GGGTGCCTCG
GCCCAGAGCG CAGAGGCCGT AAAGACCCAC ACTGGGAGTC TAGCAGGATC TTATGAGGTT
TTTAAGGCAG CCATAAAGAC AGTGGGAGGG ATATTTGTTG AGAACCTTAA GGATTTCTTA
AACCTATCAA AACTTGTTAA CTCCTCGGAA CCTATCAGGG AAGAGATCCT GGTGGTGACC
AACTCAGGAG GTCACGGTGT ACTGACTTCA GATGCCATAA GTAGGGCTGG ACTATCCCTC
GTAAAAATTC CTGAAAGGCT AAACATGGAA CTCAGAAAGG TCCTTCCACC CCAAAGCATA
CCGAAGAATC CCCTTGACCT ATCCGGAGAT GCAGGAAGAG ACAGGTATCT AAATTCGCTC
AAGATAGTAT CAGACCTAGA TTGCACCAAA CTAGTAATTG TGGAGTCCTT GCCATTTATA
AGCTGTACGG AGGTGGCAAA GGTCCTGCTC AACTTCAAAG GAAAGGGAAT CATAGGCGTA
ACAATGGGAT ATGACGAAGA TTCAGCCTCG AGAATTCTTG AGTCAGCCTC AATCCCCGTT
TTCACGTTCC CGGAGGAGGC CGTGAACGCG ATAAGTAAGC TAGTGAAGAG ACCTTCACCA
AGAAGAAAGG TTAGGGTTAC CCAACCCATT GACAGCGCAC GGGAACTAAG CAAGGGTAAA
AGTTTCTTGG CAGATTATGA GGGGCTTAAG CTCATGGAAC TCTATGGAAT AAGGACGCCA
AGATGGGGGA TTGCTAACAC GCTGGAGGAG GCGCAGAGGC TAGCGGATTC TATTGGTTAC
CCTGTGGTCA TGAAAATCTC CACAGATCAG CCGGTACACA AGACCGAGCT CAAGGGGGTT
TACATGAACG TGGAAAGAGA CATGGTTAAG GAGAAGTTTG ATCTTCTCTC CAAGATTTCC
AAGAGGGTAA TGATTCAGGA ACAGCTAACA GGTCTAGAGG CCTATGTGGG TGGAATCAGG
GATCCGGTGT TTGGTCACAC AGTCCTGATC GGCGTGGGAG GAATATATGT AGAGGTCCTG
AAAAGTGTTA GCTATGGTAT CGCCCCAGTG TACGAGGATG AAGCTCTGGA AATGTTAAGG
GAAAGCAAGC TCCTGGACAT GATTAGGGCA AGAAAGAGGG GCTATGACGA GGGTTCTGTG
ATAAGAACGG TCTCCAATAT ATCGAGGCTC ATCTTGGATC TAAATGTGAA GGAGATGGAC
ATAAATCCTC TAATGGTCAA TGAGAAGGGA GCCTTTGCGG TTGACGTTAG GGTAACGTTT
TAG
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| Protein sequence | MSLDYLFRPR TIAVVGASRN REKVGNVIFR NVASTFRGKV YPVNNKSETI EGVQSYKSLK
DIQDDVDLAI ISVPRESVPG VMEEAGEKGV RSAIVITSGF REVGEEGEKL EREVASIANK
YGIRFLGPNT MGLLTPDYNG TFAFADVKRG EIALVVQSGG IGAYMLNWAQ KSRTGVSFLV
SLGNQTDVKE YEVIDYLAKD PETKAIFVYI EGVSDGEKFL NVVPEATSRK PVIFIKGGAS
AQSAEAVKTH TGSLAGSYEV FKAAIKTVGG IFVENLKDFL NLSKLVNSSE PIREEILVVT
NSGGHGVLTS DAISRAGLSL VKIPERLNME LRKVLPPQSI PKNPLDLSGD AGRDRYLNSL
KIVSDLDCTK LVIVESLPFI SCTEVAKVLL NFKGKGIIGV TMGYDEDSAS RILESASIPV
FTFPEEAVNA ISKLVKRPSP RRKVRVTQPI DSARELSKGK SFLADYEGLK LMELYGIRTP
RWGIANTLEE AQRLADSIGY PVVMKISTDQ PVHKTELKGV YMNVERDMVK EKFDLLSKIS
KRVMIQEQLT GLEAYVGGIR DPVFGHTVLI GVGGIYVEVL KSVSYGIAPV YEDEALEMLR
ESKLLDMIRA RKRGYDEGSV IRTVSNISRL ILDLNVKEMD INPLMVNEKG AFAVDVRVTF
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