| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1386 |
|---|
| Symbol | |
|---|
| ID | 5104596 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1361397 |
|---|
| End bp | 1361627 |
|---|
| Gene Length | 231 bp |
|---|
| Protein Length | 76 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640507275 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001191468 |
|---|
| Protein GI | 146304152 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00544804 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
|---|
| Fosmid unclonability p-value | 0.00000471619 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG TAGTCTCTGT GAGGCTGAAG AGGGAGGTAA TCAGGGAGAT AGACGAACTT
GTATCCCTAG GGTTGTTTAG CTCGAGGAAT GAGGCGCTGA GCTTCATCAT CTCTGAGGGG
CTCAAGGAGG CTGAGGAGTG GAGGCGGGTC CTAGATAGGT CTAAGAAGGT GGGCGTTCCC
CTCCTGGACA AGCCATTAGA GGACTTCCTG AGCGAAAGGG ATAGGTATTG A
|
|---|
| Protein sequence | MSEVVSVRLK REVIREIDEL VSLGLFSSRN EALSFIISEG LKEAEEWRRV LDRSKKVGVP
LLDKPLEDFL SERDRY
|
|---|
| |