| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1373 |
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| Symbol | |
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| ID | 5103432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1345361 |
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| End bp | 1346815 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640507262 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_001191455 |
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| Protein GI | 146304139 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0348286 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAAAGG GATCTCAAGA GCAGCGAAAT GAAGAGCCTA AACGGGTCAT AGGAATCCTT
GACTTAATAT TTATCTCCTT GGGTGGACAA TCGCCTTTCC TCAGTGTGTT AACCTACGGT
GTAGAGGCGT ACCTTCTCGC GGGTACGGGA GCGTCACTGG CCATTATACT AGGTACTATC
CTGGTTCTAG TTAACGGAAT GTCAGTTTAT ATCTTATCTA GGAAATTTAC TAAAACTGGA
GGGTATTACA CCTACGCATA TTATTCCCTA ACGAAGAGGC TTGGCTTTGA GACAGGCTGG
CTGTATCTCC TCTACTCCTC CATGTACGGT TCGGCATACG TATTAGGCGC CTCCTACATT
CTTTCCACAA TAATCCCTGT TCCTGCCATC GCGGTTGCAG CAATAATCCT CACTATTTCC
AGCATATTTG CAATTTTGGG AATAAAACCC ACAGCCAAGT ACGCCATAGT TGCAAGCCTG
ATAGAGATAG GTATGATGGC TGCCCTAGCT GTGCTATTTA TGGCCTCCAC GCATTTCTAC
CTTTACAACC CAATTCCGTC CAACATTAAT CTGTCCACTC TTGCCTTGGC AATTCTTTTC
GGCTCTTCTA TTCCCACAGG TTACGGTTCC ATAACTCCCT TATCAGGGGA AGTTAAGAAT
CCAGAAAAGA GTGTTCCAAG GGCTATAATA ACTGTCATAT TGTTAGGCGG GCTACTGGCC
GCATTTGACA TTTATGGAAT AACGGATCAC GTGATCTATT TCCATTTAGT GGCTAATCAA
TTGAATTTAA TTCAGCTTAT TGAGGACAGA TTCGGTCTAT TGACTCTCGC GTTTGTCCTG
TTCGCAGCTG CCAACGACGG TATACTAGCC ACTTTAACGT ATATTATGGC AACCTCTAGA
ACCATTTTCG CTATGTCTAG GGGAGGATTT TTACCAGAGA TACTTGGAAG ACTTGAAACG
GGAAGAGGTC CGCTTTATGC GGTCATAGTC ACTGTGGTAA GTTTCGTGAT CATAGTTCTA
GGCGGAATTC TGATTACGGG TTTTAATGCC TTCCTTGCCT TTTCAATAAC TGGTTTAGTC
TCACTACTGG CAAACATATT TGTTCACTTG GCCTCAGATT TCTCTCTCTT CAAGATCTCA
CTTTCTAAAA TAAACAAAAG AATAAGCTGG TTAGTGCTTT CATTGGGAGG TATAGCGTTC
TCATCATACG AACTACTTCA GTCAATAAGG ACCTCGTCAC CAGTGATAGT CTACTTCTTT
ATGGGAACCA TTATCCTAGG ATTCCTAGCT GCTGAAATAA TAGAAATGAG CGAATCAGGA
AAGGAAGAGG ACTATCCAGA GAGGAATTCA CAGGCAAATC AACAGGGGAG TCATGACCAA
GCCAATCATC ATGAAAAGCA GCAGGTCAAT GGAAAAATCA GGGTGAAAAG GTCGGACGGC
GAGGAGGTAA CCTAG
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| Protein sequence | MSKGSQEQRN EEPKRVIGIL DLIFISLGGQ SPFLSVLTYG VEAYLLAGTG ASLAIILGTI
LVLVNGMSVY ILSRKFTKTG GYYTYAYYSL TKRLGFETGW LYLLYSSMYG SAYVLGASYI
LSTIIPVPAI AVAAIILTIS SIFAILGIKP TAKYAIVASL IEIGMMAALA VLFMASTHFY
LYNPIPSNIN LSTLALAILF GSSIPTGYGS ITPLSGEVKN PEKSVPRAII TVILLGGLLA
AFDIYGITDH VIYFHLVANQ LNLIQLIEDR FGLLTLAFVL FAAANDGILA TLTYIMATSR
TIFAMSRGGF LPEILGRLET GRGPLYAVIV TVVSFVIIVL GGILITGFNA FLAFSITGLV
SLLANIFVHL ASDFSLFKIS LSKINKRISW LVLSLGGIAF SSYELLQSIR TSSPVIVYFF
MGTIILGFLA AEIIEMSESG KEEDYPERNS QANQQGSHDQ ANHHEKQQVN GKIRVKRSDG
EEVT
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