Gene Msed_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1372 
Symbol 
ID5103431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1345004 
End bp1345360 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content50% 
IMG OID640507261 
Productdinitrogenase iron-molybdenum cofactor biosynthesis protein 
Protein accessionYP_001191454 
Protein GI146304138 
COG category[S] Function unknown 
COG ID[COG1433] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.110678 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTAG CAATTCCTGT GACAAATGGA ATGGTTGACG GACCTGGAGA GGGCCTCAAG 
GTAAGAATTT ACGAGGTGGA TAAGGAGGTC AAGCTGTTAG AGGAGTACGA TAACCCTGCA
CTTACGGCAA TGGCTGCTAG GGGGATATAC ATGCTTAGGT CTGCTCTGGA TAAGGGAGTG
ACTGCCTTTA TCGTCGCCGA GATTGGCCCA CCAGGGGTTA GGTTTCTGGA GGGAAAAGCC
AAGATATACC TGGCAGAGGG CAAAGTCGAG GGTGTCCTCA ACAAATTAAT CAAGGGAGAA
CTAAAGGAAA CGCATGAGCC TACACATGGG GAACACCACA GTCACGGACA TCACTAA
 
Protein sequence
MKVAIPVTNG MVDGPGEGLK VRIYEVDKEV KLLEEYDNPA LTAMAARGIY MLRSALDKGV 
TAFIVAEIGP PGVRFLEGKA KIYLAEGKVE GVLNKLIKGE LKETHEPTHG EHHSHGHH