| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1368 |
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| Symbol | |
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| ID | 5103427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1337397 |
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| End bp | 1339268 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640507257 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191450 |
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| Protein GI | 146304134 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCT GGATTCTCCT GATTGTTCTG GTCTTGGGGT TACTCCCAGG TGTAGGGGCT
TTTTCTTCAC CAACCATGCC TCACAACTTC ACCCTATACA ACATAACGGC GATGCAGGGT
CTAGATCCGA AGTACTACTC CTTCGAGGCT GTAGGGTATC TCCCACCCAA CGAGACTCCT
GTCACTGTCA CGGTAGCCAA GAACCTAATA TTCAACGATA CGGCGTGGAA ACCCTACTAC
TTGAACGTTC ACATTCCCAA TGGATCCTAC AGCTTCATCC TCATGAACGT TAGCGTGAAG
GAAGAGAATG GAACCCAGTT TGATCGCCCC TTCTACATTT TCGTGAACGG CATACCGGTG
TTCTGGGGAT CTACACAGGA GATTCAGAAC TCGAGTGCCT CTGTAGACCT AACCATGTTT
GAAAACCTCC TACACGGAAA CGTAACCTTT GAACCTGTCC TCGTGAATTT CTACGACGCA
AAGGTGAACA TAACAGGGAT CTATCTAGTC AACATAACTC TGTCCCTCTA CCCAGGACAG
GCCCCGAGTA ACTTGCCCAA CGAGTTCATA CCTCTCTTCG TGAATGGGAC TTTCAACTAC
AACTACTCGT ACGTCATTCT TAACCCTAAT CAGGACACTA TTACTTCTTC GGTTAAGTTA
CCTAACGGCA CGTATAGGAT GTCAGCTTTC CTTTACGAGG AAGGCGGAGG ACTAGACGAG
TTCTGGTACA GTAACGAGCC GGCCACCAGG GACATCCTGC TCTACTATGA CGGTCTCCTC
GGAGGAGTAG TTCCTCCTTA CGAAACAATA TACACTGGTG GTATTGATCT GTTCTGGTGG
AAGCCACTTT CCAGCATTAA CACGCTGGCA TTTCACACGC CCTATCAGGT GGATCTTACT
CCTCTTCTGG CGCTGGGATC TAATGCTAAC GTCACAGTGA CAGTCTCTAA CTTAGGAACT
GCGAAGGAAC TAACGGGTAG TTCCTCCTTC GACTGGGACC TATCAGGGTT CCTGGCTCTG
TGGGTAAATC AGAGCAATCC TCTAATCTCT GGGCAGGTAG TGAAGGCCTA TACTAGGTTT
ATTGACTCCT CGCCCATCTT TGTTGGCGGT TTCTCAGGGG TTCATTATCA GGAGGGAGGT
AGCTACACCC TCACTTACTC CTCAATTCTA AGGTTCCTTC ACGGTACCGA GATGGCAACA
GTCTCCCAGA CAGGAAGATT CTACGCCTCC CAGACCTTCA ACAACATCTA TCAATTCGCA
TATCTGGACG AAACCTTCAA GGAAATTGCA AATGAGACCG GGTTCTACTC CTCCTCCATG
TATCTGGCGG GCAACTACCC CGTGACACTG CAGATTTCAG CGTTTGCCAC TCCAATAACC
TCACCTAACG TGATACCCTT CAATCTGTCA TATGCGCAGA ACGGATCCAT TCAACTGGGT
GCGAATTACC TGTACTCATT TAGCCTTAAC GGTTACGTCA CGAGGCAATC CCTTCAAGAG
AACTTGACCG CTCAGGGAGG TTTCTCTGGG ATAATTGAGG TGATCAATAG TTATGGCGGA
GCCGTTCTCG TTAAGCTCAC GTCCAATAAC GCCCTAACTC AAAAGTACCT CACCTTCATC
TATCAGGAAC CGGGTGTAAC CGAGTTCAGG GAAAACTTCT TCGCCATGGC CGGACAGAAC
AGCTCCGTGA ATGCTACGGG CTACTACCTG AAAATACAGA GGAGTTTTAC ACCACTAACT
GACCCTGCCT ACCAGGAAGT TGTAAGCTTC ACTGAAGATC ATCTTACTGT AGATCATCTG
GTGGCATATC ATCGAAGTAT TCTGGCGGAA CTTCCTCGCT TTGCTCTTCT TCCACATCCC
TCCCCTTTTT AG
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| Protein sequence | MKSWILLIVL VLGLLPGVGA FSSPTMPHNF TLYNITAMQG LDPKYYSFEA VGYLPPNETP
VTVTVAKNLI FNDTAWKPYY LNVHIPNGSY SFILMNVSVK EENGTQFDRP FYIFVNGIPV
FWGSTQEIQN SSASVDLTMF ENLLHGNVTF EPVLVNFYDA KVNITGIYLV NITLSLYPGQ
APSNLPNEFI PLFVNGTFNY NYSYVILNPN QDTITSSVKL PNGTYRMSAF LYEEGGGLDE
FWYSNEPATR DILLYYDGLL GGVVPPYETI YTGGIDLFWW KPLSSINTLA FHTPYQVDLT
PLLALGSNAN VTVTVSNLGT AKELTGSSSF DWDLSGFLAL WVNQSNPLIS GQVVKAYTRF
IDSSPIFVGG FSGVHYQEGG SYTLTYSSIL RFLHGTEMAT VSQTGRFYAS QTFNNIYQFA
YLDETFKEIA NETGFYSSSM YLAGNYPVTL QISAFATPIT SPNVIPFNLS YAQNGSIQLG
ANYLYSFSLN GYVTRQSLQE NLTAQGGFSG IIEVINSYGG AVLVKLTSNN ALTQKYLTFI
YQEPGVTEFR ENFFAMAGQN SSVNATGYYL KIQRSFTPLT DPAYQEVVSF TEDHLTVDHL
VAYHRSILAE LPRFALLPHP SPF
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