| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1358 |
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| Symbol | |
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| ID | 5103417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1330293 |
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| End bp | 1331201 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507247 |
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| Product | 5-carboxymethyl-2-hydroxymuconate Delta-isomerase |
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| Protein accession | YP_001191440 |
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| Protein GI | 146304124 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGGCTCT TTACCTTCCT AAAATTCGGT GAAACTAGGG TTGGCCTGGA GAGGGATTCC
AGGAGACTCG ACCTATACGA GGCCTATAGG CTGGTGTATG GGACCAGGGA AGCTCCGGGT
TTTCTTCTAG ACATGAAGAA GTTGATAATG TTGGGCAAGC CAGTGATGGA CGTACTACAC
GAACTGGAGA GAGAGTGGCC TAGGGAGGCC GAACTTTCAG GTCAACTGGA GTGGTCTCCC
CCTGTACCCT TCCCTGAGAA GATCCTCTGC CCCGCAGTTA ACTATAAGGC GCACGGCCAG
GAGGCTGGAA CTCCGCCTCC ACCTAAACCC TACTTTTTCA CCAAGTTTGC AAGCTCCCTT
GTGGGCCACG AAATGCCAGT TGTTAAACCC AAGGTTACTG AGAAGCTAGA TTGGGAAGTT
GAGCTGGGGA TAGTCATAGG GAAACCTGGG AAGTACGTGG AGCCTGAACG TGCCCTGGAT
CACGTTTTCG GGTTTACAGT GTTTAACGAC GTGTCTGTTA GGGATTGGCA ATTCCCTGAG
GGATGGCCAA AGATCTTGAA CCCATATGGC CAAAACTGGG TTTGGGGAAA GGCAATGGAT
AGGACTACGC CAGTGGGACC TGTAATTGTG ACTAGAGATG AGATAAGAGA CCCCAACTCC
CTCTCCATGA TCCTCAAGGT AAATGGCAAC GTGGAGCAGA ACGGAAACAC TAGGGATCTC
ATCTTTAATG TCCAGGAACT TGTGAGTTGG GCGTCAAGGG GCATAACCCT TTCCCCTGGT
GACATAATCT CCACGGGAAC CCCACCAGGA GTCGGTTTTG CAAAGGGGAA GTACCTCAAG
CCTGGGGATG TGATGGAGGC GACCATAGAG GGTATTGGAA CACTAAGAAA TAAAGTGGAA
CAGGAATAG
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| Protein sequence | MRLFTFLKFG ETRVGLERDS RRLDLYEAYR LVYGTREAPG FLLDMKKLIM LGKPVMDVLH
ELEREWPREA ELSGQLEWSP PVPFPEKILC PAVNYKAHGQ EAGTPPPPKP YFFTKFASSL
VGHEMPVVKP KVTEKLDWEV ELGIVIGKPG KYVEPERALD HVFGFTVFND VSVRDWQFPE
GWPKILNPYG QNWVWGKAMD RTTPVGPVIV TRDEIRDPNS LSMILKVNGN VEQNGNTRDL
IFNVQELVSW ASRGITLSPG DIISTGTPPG VGFAKGKYLK PGDVMEATIE GIGTLRNKVE
QE
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