Gene Msed_1357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1357 
Symbol 
ID5103416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1329899 
End bp1330240 
Gene Length342 bp 
Protein Length113 aa 
Translation table11 
GC content52% 
IMG OID640507246 
Producthypothetical protein 
Protein accessionYP_001191439 
Protein GI146304123 
COG category[S] Function unknown 
COG ID[COG4831] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGT CGCAGAAACT GGAAAGACTC ATGAAACTAA AGGGAGCAGT GGCAGCAGGT 
AAGTATACCA TGGATGGGAA ACTCGCAGAG TATAAGGGGA ATCTGCCCAA GGAGATGGCC
GAGATGGTAG CCATGATGTG CGCTGCGAAC ACAATGATGG GGAGGATGCA GGCCGAGGGA
TTCAGTAAGT TCTCTGGGAT GAAGTGGTCC CCGTTCCACG GCTGGGCGGT AGCTGCTGGA
GATTATGCCG TATGCGTAAT GGGACAGTAC GGAGTTTTCG TGGAGATGGC CAAGGCAGAC
TTCAACGAGA TATTCAAGAC CCTAATGGAA GTGGCCAAGT AA
 
Protein sequence
MSESQKLERL MKLKGAVAAG KYTMDGKLAE YKGNLPKEMA EMVAMMCAAN TMMGRMQAEG 
FSKFSGMKWS PFHGWAVAAG DYAVCVMGQY GVFVEMAKAD FNEIFKTLME VAK