| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1353 |
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| Symbol | |
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| ID | 5103412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1323783 |
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| End bp | 1325777 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507242 |
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| Product | acetyl-CoA synthetase |
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| Protein accession | YP_001191435 |
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| Protein GI | 146304119 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000252998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAC CAGAAAATGA ATCAGGTCTA CCTTTTCAAG AGAAAGTTGT ACCTGAGTTA
CTCAAACACA GGTTAGTGAC ACCTGAGGAA TACCTAAGAA TTCACAAGAA GACCGTAGAG
AACTACCAAG AGTACTGGGA ATCCGTAGCT AAGGAACTGG ACTGGTTCAA GCCATGGGAA
AAGGCGCTTG ACGATTCGCA TCCTCCTTTC TATAAGTGGT TTGTTGGAGG AGAGCTGAAC
GCGTCTTATC TTGCAGTGGA TAGGCACGCC AACTCATGGA GGAGAAATAA GGTAGCTATA
ATCTGGGAGG GAGAGCCGTG GGAAAACGGT CCCAAGGAAG TCAGGAAATT GACGTACCTT
GACCTATACC GTGAGGTAAA TAGGGCAGCC TATCTCCTCA AGGAAGTTTA CGGCCTAAAG
AAGGGCGATA CCATAGGGAT TTACCTTCCC ATGATTCCAG AGCTTCCAAT ATTCATGCTT
GCTGCCGCCA GACTAGGCGT AGCTTTCACT GTAGTCTTCT CGGGATTCAG TGCACAGGCG
GTAGCTGATA GGATGAACGA TGCCGACACC AAGTTGCTTA TCACAGCTGA TGGTGGTTGG
AGAAGGGGGA AAGTGATACC CCTCAAGGAG ATCGTGGATA AGGCGCTTGA GACAGCCACC
ACAGTGAAGA ACGTGTTGGT GGTCAGGAGA ACCGGAACAG AGATTAGCAT GAAACCCGGA
AGAGATGCCT ACTTACACGA CGTGATGAGT AAGGTTCCGA TTAAGGCCTA CGTGGAGCCG
GAGAGGGTGA AAAGTGAGGA TCCTCTTTAC ATTCTTTACA CCTCTGGCAC CACGGGGAAG
CCTAAGGGCA TAATTCACGA CACAGGCGGA TACATGACTC TCCTTCATAA CACCATGAAA
CTTGTGTTTG ACATTAGGGA TACAGACGTT TTTTGGTGCA CCGCAGACAT AGGATGGGTA
ACTGGTCACT CCTACATCGT GTTCGGGCCC CTTCAGGAAG GAGCGACTGA GGTCATGTAC
GAGGGAGCCT TGGACTTCCC TGAACCTGAC AGGTGGGTCT CGATCATAGA GAGACATCAG
GTCTCAATAC TTTACACTTC ACCCACGGCG ATAAGGACGT TCATGAAGCA GGGAGAGCAA
TGGATAAAGA AGCACGACGT TAGCAGCGTA AGGCTAATGC ACTCAGTGGG AGAGCCAATT
AACCCTGAGG CGTGGAGATG GTTCCACAAA CTAGTGGGGA GAGGACAAGT TCCCTTTGGT
AGCACTTGGT GGATGACTGA AACTGGTGGA ATAATGATAT CACACATGCC TGGTGGATAC
CTAGTGCCCA TGAAACCTGG AACCAATGGT CCTCCTCTTC TTGGCATAGA GACTAACGTA
TTTGACGAGG AAGGAAAACC CATGCCAGAG GAGCAGAAGG GTTACCTAGT GATTACCAAG
CCGTGGCCTG GCATGCCACT CACTATCAAC AAGGATCCAG AAAGGTACGT TAAGGTATAC
TGGAACAAGT TTCCCAACGT TTTCTACGCC GGAGATTACG CGATCAAGGA TAGGGATGGT
TACTTCTGGA TACTGGGGAG AGCCGACGAG GTAATGAAGA TTGCCGGACA CAGGATTGGA
ACGTATGAGC TGGAGTCGGC CCTCGTGCAA CATCCAGCGA TAGCCGAAGC AGCAGTAGTT
GGTGTTCCAG ATCCTGTCAG GGGAGAGGTG GCTGAGGCCT TCGTCATCCT CAGATCTGGA
GTGGAGCCTA GCGCTAAGCT AAGGGAGGAG ATTGTGAAGT TCGTGAGAGA AAACTTCGGT
CCCATAGCGG TGTTCAGGGA AATCCACTTC GTCTCGAAGC TACCCAAGAC CAGAAGCGGA
AAGATCATGA GGAGGGTAAT CAAGGCGGTT GCAACTAACT CTCCCGTGGG CGACGTCACC
ACGCTAGAGG ATGAGGCCTC TGTGGAGGAG GTAAAGAAAG CCTTCCAGGA GCTCAAGGAA
CAGGTCGGGA AGTGA
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| Protein sequence | MSQPENESGL PFQEKVVPEL LKHRLVTPEE YLRIHKKTVE NYQEYWESVA KELDWFKPWE
KALDDSHPPF YKWFVGGELN ASYLAVDRHA NSWRRNKVAI IWEGEPWENG PKEVRKLTYL
DLYREVNRAA YLLKEVYGLK KGDTIGIYLP MIPELPIFML AAARLGVAFT VVFSGFSAQA
VADRMNDADT KLLITADGGW RRGKVIPLKE IVDKALETAT TVKNVLVVRR TGTEISMKPG
RDAYLHDVMS KVPIKAYVEP ERVKSEDPLY ILYTSGTTGK PKGIIHDTGG YMTLLHNTMK
LVFDIRDTDV FWCTADIGWV TGHSYIVFGP LQEGATEVMY EGALDFPEPD RWVSIIERHQ
VSILYTSPTA IRTFMKQGEQ WIKKHDVSSV RLMHSVGEPI NPEAWRWFHK LVGRGQVPFG
STWWMTETGG IMISHMPGGY LVPMKPGTNG PPLLGIETNV FDEEGKPMPE EQKGYLVITK
PWPGMPLTIN KDPERYVKVY WNKFPNVFYA GDYAIKDRDG YFWILGRADE VMKIAGHRIG
TYELESALVQ HPAIAEAAVV GVPDPVRGEV AEAFVILRSG VEPSAKLREE IVKFVRENFG
PIAVFREIHF VSKLPKTRSG KIMRRVIKAV ATNSPVGDVT TLEDEASVEE VKKAFQELKE
QVGK
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