| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1352 |
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| Symbol | |
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| ID | 5103411 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1323125 |
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| End bp | 1323685 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507241 |
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| Product | GPR1/FUN34/yaaH family protein |
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| Protein accession | YP_001191434 |
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| Protein GI | 146304118 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1584] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000041614 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAC AAAAAAGAGC AAACCCCGCA CCCCTAGGTC TATCTGGTTT CGCCTTAACC
ACCCTTGTTT TAAGTACATA TAATGCAGGG CTACTTTCGA GCGGCGTTAA TGCCGTTCTT
GGGCTTGCAG CTTTTTACGG AGGATTAGCC CAGCTCCTTG CAGGGATACT GGAGTGGAGA
GCAGGGAATA CGTTCGGTTA TGTGGCCTTC TTTACATACG GAGCTTTCTG GGAGTGGTTC
TTCCTTACCT CGTTGGGAAT TTACGGAGGA GTTACTGCAG TGGGTATAGG ATATGTACTG
GTAGCATTTG GCATATTCAC CTTTGTAATG TGGTTAGGAA CCTTCAAATC GAACATGGGA
TTATTTGCGA CTTTCCTGTT GTTATGGATA ACTTTCTTCC TCCTAGGAAT AGGCGCCATG
ACAGGGAACG AGGGGGCATT TCATGCTGGA GGATATGTAG GTATTTTGAC GGCCATTGCT
GCGTGGTACA CGGGATTGGC TCAGGTTGTG GCTGAGGCAC TGGGCGCTAA AGCTCCTCTG
GGAAGGGCCC CAATGTCTTG A
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| Protein sequence | MTEQKRANPA PLGLSGFALT TLVLSTYNAG LLSSGVNAVL GLAAFYGGLA QLLAGILEWR
AGNTFGYVAF FTYGAFWEWF FLTSLGIYGG VTAVGIGYVL VAFGIFTFVM WLGTFKSNMG
LFATFLLLWI TFFLLGIGAM TGNEGAFHAG GYVGILTAIA AWYTGLAQVV AEALGAKAPL
GRAPMS
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