Gene Msed_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1334 
Symbol 
ID5104585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1311734 
End bp1312426 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content35% 
IMG OID640507223 
Producthypothetical protein 
Protein accessionYP_001191416 
Protein GI146304100 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0455] ATPases involved in chromosome partitioning 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGAA AGATCATTAT AACGGGGGTA AAGGGAGGTA CTGGAAAGTC GCTTATATCT 
TTTCTCCTAC TGAGAGAATT GGTAAATACA AAGAGAGTAC TTTTCATTGA TCTAGATAAT
ACCCTGACAG TTACTAGATT ATTGGGAATT CTTCATCTTG ATGACATATT TAATAATGAC
TATAACGTTA GTTCTTGGAC CTACAAAAAT GTTAGCATAA TACCACTAGG TGTTGCAAAT
CAAGGAAAAT TGCAGGAATT TCCTAAAGCA TATATGGATC TCGTAGAAGA TAAAGATATT
ATCATGATAG ATTCCTCCAA CATCACTAAT CCAGTCCTTA GCCTTGAAGC CAAATTGAGC
CCCCAAAGCG AATTAGATCT TATCTTGGTT ACTACGCCCC AATCTATTTC ACTAAAGAGA
ACCATTGATA CCTTACTATC CTTTAAGACG ATTTACCCCA TAGCACCTTC ACAGAAGCTC
GTGGTTTTAA ACATGACTAA GGAGGAGGTT CAGGAGCTTC AGAACGATAT TCCTTTTGTA
AAAATACCCT TCATTAAGGA ACTATTTCTT AAAGGAATCT CAGCAGAATC ATGTGAATAT
CCATCTATTC TAGCCTCCAT AAGAGATATT TTGTATATTT TGGACCTGAC CAAGATATTA
GGTGATAATA ATGGAAATAA AAGAGTTTAT TGA
 
Protein sequence
MMRKIIITGV KGGTGKSLIS FLLLRELVNT KRVLFIDLDN TLTVTRLLGI LHLDDIFNND 
YNVSSWTYKN VSIIPLGVAN QGKLQEFPKA YMDLVEDKDI IMIDSSNITN PVLSLEAKLS
PQSELDLILV TTPQSISLKR TIDTLLSFKT IYPIAPSQKL VVLNMTKEEV QELQNDIPFV
KIPFIKELFL KGISAESCEY PSILASIRDI LYILDLTKIL GDNNGNKRVY