Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1319 |
Symbol | |
ID | 5104570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1297019 |
End bp | 1297375 |
Gene Length | 357 bp |
Protein Length | 118 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640507208 |
Product | hypothetical protein |
Protein accession | YP_001191401 |
Protein GI | 146304085 |
COG category | [S] Function unknown |
COG ID | [COG2427] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGAGA GAGGAGTTCA AACCCTTGAC AGAGTAATGG CTCAGCTCGT CGAGAGCGGG GAGGCCCTTG AGCAGTTCCT GAGGCTAGTG AACGCTCTCA ACAGGTCTGG GATCCTCCCC TTCCTGATCG GACTGGCGGA AAACCTAGAC GTCACGCTCT CCACACTGAC GGAACAGAAC ACTGGGCTAA TCAAGACACT GAACGTGATA TACGCTGCGC TTAACGGTGA TGAGGAGGTG CAGGACGTGT CTCTCACCCA GATATTGAAG GAGTTTAACG ACCCAGACGT TAAGAGAGGG CTATTGCTAG TGCTGAAGAT ACTTAAGGCG ATAGGAAGTG CAAGTAAGCA AGGTTAA
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Protein sequence | MDERGVQTLD RVMAQLVESG EALEQFLRLV NALNRSGILP FLIGLAENLD VTLSTLTEQN TGLIKTLNVI YAALNGDEEV QDVSLTQILK EFNDPDVKRG LLLVLKILKA IGSASKQG
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