Gene Msed_1319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1319 
Symbol 
ID5104570 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1297019 
End bp1297375 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content52% 
IMG OID640507208 
Producthypothetical protein 
Protein accessionYP_001191401 
Protein GI146304085 
COG category[S] Function unknown 
COG ID[COG2427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGA GAGGAGTTCA AACCCTTGAC AGAGTAATGG CTCAGCTCGT CGAGAGCGGG 
GAGGCCCTTG AGCAGTTCCT GAGGCTAGTG AACGCTCTCA ACAGGTCTGG GATCCTCCCC
TTCCTGATCG GACTGGCGGA AAACCTAGAC GTCACGCTCT CCACACTGAC GGAACAGAAC
ACTGGGCTAA TCAAGACACT GAACGTGATA TACGCTGCGC TTAACGGTGA TGAGGAGGTG
CAGGACGTGT CTCTCACCCA GATATTGAAG GAGTTTAACG ACCCAGACGT TAAGAGAGGG
CTATTGCTAG TGCTGAAGAT ACTTAAGGCG ATAGGAAGTG CAAGTAAGCA AGGTTAA
 
Protein sequence
MDERGVQTLD RVMAQLVESG EALEQFLRLV NALNRSGILP FLIGLAENLD VTLSTLTEQN 
TGLIKTLNVI YAALNGDEEV QDVSLTQILK EFNDPDVKRG LLLVLKILKA IGSASKQG