Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1316 |
Symbol | |
ID | 5104567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1292450 |
End bp | 1293052 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640507205 |
Product | hypothetical protein |
Protein accession | YP_001191398 |
Protein GI | 146304082 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGTGG ACATTCAACA TGTTGGGATT AGGGGATATG AAAGAGATTT AGGGTTGGAT CTGGTTCTTC TTAACCCGTC ATACAGGCTA GGTTGTCAGT GCTGTGTGGA CGGTTTCTAT CAACAGTATC TTTGGTCGAG GGGAAGGAAG GGATACATAC AGCTGGGTAT TTACAATCCC AGGTGCAGGG TTCCAGTAGA GGTGGAACTG GAGAGGCAGA TCAGGAAGGG GATTGTTGGC GTGGTGTTGA ACCCTGCAAA CCACGGGTAC TCCTTGAGGG AGGCCAAGAG GACAGTGGAG TACGTCAACA GGAAGAGGCT CAACCTCTAC CTTTACACTA GGACGCTGTC ACTTGAAGAA CTTGAGGAAT TGAATGACGG GCTTGACGTG AAGCTGGTGA TCCTGGATCC TAGGGAAGAG ATATCTCCGC TCTCTAGAGA GAGTAACGTT TACTTCAATG TCAAGGATTA CTCGGGGGAT TTACCAAGTA AGAGGGCAAT ACTAGCCACG TTTTACCCCT ATGAGAGTGA GAAGGTGGCC AGGGAATTAC TCTCAAGGTT TAGCTGGACT TTTGATAACT TGCTTGAACT GGTAAGTACA TGA
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Protein sequence | MIVDIQHVGI RGYERDLGLD LVLLNPSYRL GCQCCVDGFY QQYLWSRGRK GYIQLGIYNP RCRVPVEVEL ERQIRKGIVG VVLNPANHGY SLREAKRTVE YVNRKRLNLY LYTRTLSLEE LEELNDGLDV KLVILDPREE ISPLSRESNV YFNVKDYSGD LPSKRAILAT FYPYESEKVA RELLSRFSWT FDNLLELVST
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