Gene Msed_1316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1316 
Symbol 
ID5104567 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1292450 
End bp1293052 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content48% 
IMG OID640507205 
Producthypothetical protein 
Protein accessionYP_001191398 
Protein GI146304082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGG ACATTCAACA TGTTGGGATT AGGGGATATG AAAGAGATTT AGGGTTGGAT 
CTGGTTCTTC TTAACCCGTC ATACAGGCTA GGTTGTCAGT GCTGTGTGGA CGGTTTCTAT
CAACAGTATC TTTGGTCGAG GGGAAGGAAG GGATACATAC AGCTGGGTAT TTACAATCCC
AGGTGCAGGG TTCCAGTAGA GGTGGAACTG GAGAGGCAGA TCAGGAAGGG GATTGTTGGC
GTGGTGTTGA ACCCTGCAAA CCACGGGTAC TCCTTGAGGG AGGCCAAGAG GACAGTGGAG
TACGTCAACA GGAAGAGGCT CAACCTCTAC CTTTACACTA GGACGCTGTC ACTTGAAGAA
CTTGAGGAAT TGAATGACGG GCTTGACGTG AAGCTGGTGA TCCTGGATCC TAGGGAAGAG
ATATCTCCGC TCTCTAGAGA GAGTAACGTT TACTTCAATG TCAAGGATTA CTCGGGGGAT
TTACCAAGTA AGAGGGCAAT ACTAGCCACG TTTTACCCCT ATGAGAGTGA GAAGGTGGCC
AGGGAATTAC TCTCAAGGTT TAGCTGGACT TTTGATAACT TGCTTGAACT GGTAAGTACA
TGA
 
Protein sequence
MIVDIQHVGI RGYERDLGLD LVLLNPSYRL GCQCCVDGFY QQYLWSRGRK GYIQLGIYNP 
RCRVPVEVEL ERQIRKGIVG VVLNPANHGY SLREAKRTVE YVNRKRLNLY LYTRTLSLEE
LEELNDGLDV KLVILDPREE ISPLSRESNV YFNVKDYSGD LPSKRAILAT FYPYESEKVA
RELLSRFSWT FDNLLELVST