Gene Msed_1314 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1314 
Symbol 
ID5104565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1291497 
End bp1291949 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content46% 
IMG OID640507203 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_001191396 
Protein GI146304080 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1225] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTGA AGGTAGGAGA CCAAGCTCCA GATTTTGAGG GAGTAAGCGA GAGAGGAGAT 
AAAGTAAGGC TCTCAGATTT CAGAGGAAAA TACGTTGTGC TCTATTTCTA TCCAAAGGAC
GATACACCTG GATGTAGGGC AGAGGCCCTT AGTTTCAAGG AAAACTGGGA TGAGATATTA
AAGAGGGGGG CCGTGGTCCT GGGGGTTAGC GGAGATTCCC CAGAATCACA CGTAAGGTTC
AAGGAGAAGT ATGGCCTTCC CTTCACCTTG ATCAGTGATG AAGGGGATAA AATAAGGGAA
CTATACGGGG CAAAGGGACT CCTCATTCCA GGTAGGGTTA CCTTCGTGAT TGATCCTGAG
GGAAAGATCA GGTTAATTTA TTCGTCACAA ATGAATCCAA CATCTCACGT GAAGGAAGCT
CTGAAGGTTA TACCTCCTGT ACCTACAACC TGA
 
Protein sequence
MKLKVGDQAP DFEGVSERGD KVRLSDFRGK YVVLYFYPKD DTPGCRAEAL SFKENWDEIL 
KRGAVVLGVS GDSPESHVRF KEKYGLPFTL ISDEGDKIRE LYGAKGLLIP GRVTFVIDPE
GKIRLIYSSQ MNPTSHVKEA LKVIPPVPTT