| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1306 |
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| Symbol | |
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| ID | 5104557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1285192 |
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| End bp | 1286355 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507195 |
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| Product | glycosyl transferase, group 1 |
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| Protein accession | YP_001191388 |
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| Protein GI | 146304072 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.647455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAGAGTTC TCGCAGTGGT GGACTTCGGC CTCGTGGAGC ATAGTGGTGG GTACAAGAGA
AACCTGGAAA TTATGAGGAG GTTACCCTCC TACCTCGAGG TGGATATAGT TCCCTCATTG
AGGAATGTGA GGCTCGCCTT AAGCGGGCAT AGGGATGAGT TGATCTCCTT ACTGAAGGAC
TTGAAGGCTA CCGTCTCCCT CGATGCGTTA AGGGATGCAA ACTCACTGGA GGAGTTCCTT
AAACTCCTGA GACCAGGTAA ATACGATCTC GCCCTCGTGT ATAGTAACTC TGGTGAAAAC
GTGGAGTTAG CCTCGACCCT GACCAATTCC CCCGTCGGCG TTCAACTGCA ACTGGAACCC
TTCTATAGGG ATCTCTCGAC CCTCTTCAGG ATCAAGTTCA GGGGGTCAAC AGGGAGAGCC
CTCACCAGGT TTCAGAGGGC AGTTCAGGAG TCCAAGGAGG AGGAGAGAAC CTGGCTATCC
CTGATTAGGG CGGGAAAGTT GAACTTCGCC ATTTCCGTGA GCAGGATTCC CTTAACTTAT
TCAGGCCTAG ATCAGATGAT CCCATATGAC GTCACGACCC CGGGGAATGC CATAGATCCA
GAGGTGAGCA AGGTGAGGAG GGAGAAGGAG GATTACGCAG TCTACTTCAC CAGGTTAATT
CCCGAGAAGG GACTCTTTGA CGTCCCCCTA ATCTGGAAGA GGGTAAACGA GCATAGGGAC
ATGAGGCTTT ACGTGATGGG ACAGTTCCTG AGCGAGGATG ACCGGGAGGA GTTTACCAGG
CTCGTCCGCA GACTTAACGT TAACGTGGAG TACCTGGGCT TCAGGAGTGG GGAGGATTTG
TACAAGGTCG TGGCTGGGGC CCAGTTCACG CTTTATCCCT CGCACTACGA CAGCTTCTCC
CTTGTGGTGT TGGAATCGTT GGCCCTGAAC ACTTCCGTAA TAGCTTATGA TACACCCGCA
ATCAGGGAGA TATATCGCGG TGTTAAGGGC GTTCACACCG TGGAGGAGGA CAACTTAAGC
GGTATGGCCT CCCTGTGCCT GAAGCAGGAG AGGAGTGAGG TTAACGTCCC TGAGATGTAT
TCCTCCTGGG ACAAGGTAGC CCTCGCTGAA CTCGCCTCAA TTAATAGAAT GGCCAGGACG
TTCTCGATTA ACGGAATTTT CTAG
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| Protein sequence | MRVLAVVDFG LVEHSGGYKR NLEIMRRLPS YLEVDIVPSL RNVRLALSGH RDELISLLKD
LKATVSLDAL RDANSLEEFL KLLRPGKYDL ALVYSNSGEN VELASTLTNS PVGVQLQLEP
FYRDLSTLFR IKFRGSTGRA LTRFQRAVQE SKEEERTWLS LIRAGKLNFA ISVSRIPLTY
SGLDQMIPYD VTTPGNAIDP EVSKVRREKE DYAVYFTRLI PEKGLFDVPL IWKRVNEHRD
MRLYVMGQFL SEDDREEFTR LVRRLNVNVE YLGFRSGEDL YKVVAGAQFT LYPSHYDSFS
LVVLESLALN TSVIAYDTPA IREIYRGVKG VHTVEEDNLS GMASLCLKQE RSEVNVPEMY
SSWDKVALAE LASINRMART FSINGIF
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