| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1303 |
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| Symbol | |
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| ID | 5104554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1282148 |
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| End bp | 1283329 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640507192 |
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| Product | gluconate dehydratase / galactonate dehydratase |
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| Protein accession | YP_001191385 |
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| Protein GI | 146304069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATCC AAGAAATTAC GCCGTTTGTC CTCTCCTCCA AGGAGAGGGG ATCTGCAACC
TGGGCCTCTA CCATGATCGT GGTGAAAGTG ACCACAAGTG ACGGAATGAT AGGTTATGGT
GAGGCCGTGC CTACGTTGAG GGTTAAGCCC GTGTTTAGTG CAATCCAACA GGTTAGCAAG
GGCTATCTGG GAAAGGAGGT CGAAAGAGTA GAAAGGAATT ACCACGAATG GTACAAGCAG
GACTTCTATC TCAGCAGATC CTTCGAGTCC GCAACGGCAA CCAGCGCGAT AGATATTGCG
CTCTGGGACC TTGTGGGAAA GGAGTTGGGA GCACCGATTC ACAGGCTACT GGGCGGAAAG
TTTAGGGACC ACGTACCCGT TTACGCGAAC GGGTGGTACA AGGACTGTGT TACGCCAGAG
GACTTCGCTA GGGAGGCAAA GAACGTGGTT AAGAGGGGGT ACAGGGCCAT GAAGTTTGAT
CCCTTTGGAC CATACTACGA TTGGATTGAT GAACATGGAT TGAGACAGGC AGAGGAAAGG
GTGAAGGCAG TCAGGGAAGC TGTTGGGGAA GAGGTCGAGA TCTTGATTGA ACATCACGGG
AGGTTCAACG CAAACTCGGC TATTGAGATT GCGAAGAGGC TCGAGAAGTA CAGACCACTG
TTCGCTGAGG AGCCAGTTCA CCACGAGGAT CTGGAGGGAT ATAGGAAATA CAAAAGACAC
TCCAACCTAA GGGTGGCAAT GGGAGAGAGA CTGGTGAGCT TGAAAGAAAC TCTGGTTTAC
TTGAGGGAGG GGCTAGTGGA CATCCTACAA CCTGACTTGA CCAACATCGG TGGAGTTACA
GTTGCCAGGA AAGTAGCATC GCTAGCTGAG GCCTTCGACG TTGAAGTTGC CTTCCACAAT
GCCTTCGGTT CAATACAGAA CGCGGTCTCA ATCCAGTTGG CGTCGGTTAT TCCTAACCTA
CTCCTGCTGG AGAACTTCTA CGACTGGTTC CCACAATGGA AAAGGGATCT CGTGAATAAC
GGAACTCCAG TTGAGATGGG AAGAGTGAAG GTACCGGATG GACCTGGCAT AGGAGTTGAG
GTTAACGAGA GGATACTGGA GGAGTTGAAA ACCGATCCTG TTGCGCTTGA GGTTGTGGAG
GAGCCTGTGT GGGTTGTGGG CGGAACGTGG AAAAACTATT AA
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| Protein sequence | MKIQEITPFV LSSKERGSAT WASTMIVVKV TTSDGMIGYG EAVPTLRVKP VFSAIQQVSK
GYLGKEVERV ERNYHEWYKQ DFYLSRSFES ATATSAIDIA LWDLVGKELG APIHRLLGGK
FRDHVPVYAN GWYKDCVTPE DFAREAKNVV KRGYRAMKFD PFGPYYDWID EHGLRQAEER
VKAVREAVGE EVEILIEHHG RFNANSAIEI AKRLEKYRPL FAEEPVHHED LEGYRKYKRH
SNLRVAMGER LVSLKETLVY LREGLVDILQ PDLTNIGGVT VARKVASLAE AFDVEVAFHN
AFGSIQNAVS IQLASVIPNL LLLENFYDWF PQWKRDLVNN GTPVEMGRVK VPDGPGIGVE
VNERILEELK TDPVALEVVE EPVWVVGGTW KNY
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