| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1294 |
|---|
| Symbol | |
|---|
| ID | 5104158 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1272016 |
|---|
| End bp | 1272387 |
|---|
| Gene Length | 372 bp |
|---|
| Protein Length | 123 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640507183 |
|---|
| Product | heat shock protein Hsp20 |
|---|
| Protein accession | YP_001191376 |
|---|
| Protein GI | 146304060 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGATCC TTTTACGTGA ACTTGGTAAA CAGTTGAATG ACCTGACCAA GGAATTTTAT
GAGAAGGTGC TCCCACCAAT AGACGTGTAC GAGCAGGGTA ACACCCTTGT GGTTATTGTG
GACATGCCGG GTTTCGACAA GTCCAGCATT AGTATAAGGC TATCGTCTGA TGGAGTTCTC
AGAATTGAGG GAAAGAGGGA CGTGGAGCAG GCTGGAATAA AACACGTGGC GCAAAGACCC
TCAAGGATGA TGAGGGAAAT CAGGTTACCA GTCAAGGTTC CTAAGGACGC TGAGGTAACA
GGGAAATATG AGAACGGTGT TCTCACGTTA AAGATTCCCA TAGAGGGCGC AGCTAAGGTA
AAGATAGAGT AA
|
|---|
| Protein sequence | MEILLRELGK QLNDLTKEFY EKVLPPIDVY EQGNTLVVIV DMPGFDKSSI SIRLSSDGVL
RIEGKRDVEQ AGIKHVAQRP SRMMREIRLP VKVPKDAEVT GKYENGVLTL KIPIEGAAKV
KIE
|
|---|
| |