| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1292 |
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| Symbol | |
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| ID | 5104704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1269928 |
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| End bp | 1270752 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507182 |
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| Product | SMP-30/gluconolaconase/LRE domain-containing protein |
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| Protein accession | YP_001191375 |
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| Protein GI | 146304059 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGCCGT CTATTTACGT TAGGAGCAAC GCAAGGTTAG GAGAGGGACC GCTGTGGGAT
CCTAGGACGG GGACTCTTTA CTGGGTCGAT ATTGAGGGAG GAAAACTTCA CGTAACAAGG
GATGGAAAGG ATACCGTCAT AGATGCACCC CAAATGATCT CTTCATTGGG CTTAACTCAC
GAACCTGGGA CACTGATCAC GTCCGCAGGG TTAACCCTAT ACAAGTTCTC AGGGGAATTC
ACTCCCATCT CCAGCATCAC TGCGGAAGGA GTTAGATTCA ATGACGGAAA ATGTGGCCCT
AAAGGAGAGT TCTGGGTGGG AACAATGGAT CTCAAGGAGG AGAGGGACCT GGGGATCCTT
TACCGATTTA ACGGCGAGTT TACTCCCCTC GTGGATCATC TAATAATATC CAACGGAATG
GACTGGTTCA AGAACGTATA CTACCTCGTG GATAGTCCCA GGAAGAGGGT TTACGCCTTC
AGGGTTAGAG ATGACGAACT TGAAAGTCTT GGAGCGGCTG TGGATACCTC CGATTACCCG
GGAGTTCCTG ACGGAATGAC CATGGACTCC TCCGGGTTAA TTTGGGTAGC CCATTATGGA
GGAGGGTTGG TGACCGTGTG GGAGCCCTTC TCTAGGAGGC CAGTCCTGGA GATCCAGATG
CCTGTAAAGA TAGTGACCTC GGTCGTCTTT GGAGGGCCTG AACTTAACCA GCTTTTCGTG
ACCTCCTCAT CTAGGGCAGG GGAAGAACTA GGCGGTTCGG TGTTTGTGGT GGAGACGGAG
TACAGGGGAC GTGAACCCTT CGTGTGCATG GACTTCTCAC GGTGA
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| Protein sequence | MEPSIYVRSN ARLGEGPLWD PRTGTLYWVD IEGGKLHVTR DGKDTVIDAP QMISSLGLTH
EPGTLITSAG LTLYKFSGEF TPISSITAEG VRFNDGKCGP KGEFWVGTMD LKEERDLGIL
YRFNGEFTPL VDHLIISNGM DWFKNVYYLV DSPRKRVYAF RVRDDELESL GAAVDTSDYP
GVPDGMTMDS SGLIWVAHYG GGLVTVWEPF SRRPVLEIQM PVKIVTSVVF GGPELNQLFV
TSSSRAGEEL GGSVFVVETE YRGREPFVCM DFSR
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