| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1280 |
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| Symbol | |
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| ID | 5104692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1256285 |
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| End bp | 1257973 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640507170 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001191363 |
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| Protein GI | 146304047 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTACA AATGGATAGC CTTGAGCAAT ACGACTTTGG GAGTCCTAAT GGCGACGATA
AACGGCACGA TCACGATCAT CTCGCTTCCC GCCATATTCA GGGGGATAGG GATAAACCCA
CTGGCCCCCT CATCTTTCCA GTACCTTCTC TGGATCCTCA TGGGCTACAA CGTTGTAACC
GCGACGCTTC TCCTTTCCTT TGGAAGGTTG TCTGACATGT ACGGAAGGGT CAGGCTGTAC
AACCTCGGCT TCCTGGTTTT CACCGTGGGC TCTATCCTTC TCTCCTTAAC CTTTGGAAGT
GGGGATATGG CTGGCCTCGA GCTCGTGATA TTCAGGATAA TCCAGGGAAT TGGTGGAGCG
TTCTTGATGG CGAACAGCGC GGCAATCCTC ACAGACGTTT TCCCCGTCAA TGAGAGGGGT
AGGGCACTTG GAATAAACCA GGTAGCTGCG CTGGCAGGAT CGTTAATTGG GCTTATCCTG
GGAGGAATTC TATCGGTCAT AAACTGGAGG TATGTCTTCC TCGTGAGCGT TCCAGTAGGG
GTATTTGGAA CGGCGTGGAG TTACCTGAAG CTCAAGGAGA CCAGTGCAAG GAACAGGGAG
GGGATAGATT GGGTCGGTAA TGCGGTGTTC GGCCTCGGGT TAATCCTTGT ACTAATTGCA
ATGACCTACG CCCTTATGCC CTATGGCTCA GCGCAGACCG GGTGGGGTAA TCCCTTCGTC
ATACTCTCCA TGGTTGCAGG GCTGGGACTT CTGGCCTCTT TTCCCTTTAT CGAGACTAGG
GTCAAGTACC CCATGTTCAG AATGGAACTC TTCAGGAATA GGATGTTCGC TGCGGCCAAC
TTTGCTGGAT TTCTGAGGTC CATAGGCTAC GGAGGTCTCA TGATCATGAT AGTGATCTTC
CTCCAGGGGA TATGGCTCCC GCTTCACGGA TACTCCTACT CTGAAACTCC TTTCTGGGCA
GGGATATACA CGATCCCCCT AATGGTTGGA TTCGTGAGTG CGGGACCAGT GAGCGGTTGG
CTCTCAGACA GGTACGGATC GAGGGGGCTA GCTACTGCGG GAATGGTTCT GGTCGGCATA
GGTTTCTTAG CCCTGACCGC GCTACCCTAC AACTTCAGCT ATCCAGTGTT TGGAGCAATC
ATCTTCATGA TGGGAGTCGG AAATGGGATG TTCGCTTCTC CAAACACTTC CTCGATCATG
AGTAGCGTCC CCGCAAAGCA CAGGGGAGCT GCGTCGGGGA TGAGGTCAAC GCTTCAGAAC
ACTGGACAAA CGGTGAGCAT TGCCATATTC TTCACGATTG TGATCCTTTC CCTGAGTTCG
TCGTTGGGGC CGTCATTGGC TCACGCCCTA GCTCAGGCAG GCGCTCCTCA GCTTTCGCCC
TATGTACAAA AGGTTCCAGT GACCGGGGCC TTGTTCGCGG CCTTCCTTGG ATACGACCCC
GTGAAGGCCC TACTCGGAAC CTTACCCGCT TCAGTTGCCT CCCAGATTCC CAGTAGTGCG
ATCTCGATCA TGGAGCAGAG GACCTGGTTC CCAAGCGCAA TTGCCCCCAG CTTCATGTTA
GCCTTGAGGG AGACGTTCTA CTTTGGGGCT GCGCTCTCCT TCATAGCGGC AGTAGCCTCA
GCCCTGAGGG GAAAAGCTAA AATCCCGGAG GAGGTTGTCC AATATGATGC AGAGAAAACT
AGACGTTGA
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| Protein sequence | MQYKWIALSN TTLGVLMATI NGTITIISLP AIFRGIGINP LAPSSFQYLL WILMGYNVVT
ATLLLSFGRL SDMYGRVRLY NLGFLVFTVG SILLSLTFGS GDMAGLELVI FRIIQGIGGA
FLMANSAAIL TDVFPVNERG RALGINQVAA LAGSLIGLIL GGILSVINWR YVFLVSVPVG
VFGTAWSYLK LKETSARNRE GIDWVGNAVF GLGLILVLIA MTYALMPYGS AQTGWGNPFV
ILSMVAGLGL LASFPFIETR VKYPMFRMEL FRNRMFAAAN FAGFLRSIGY GGLMIMIVIF
LQGIWLPLHG YSYSETPFWA GIYTIPLMVG FVSAGPVSGW LSDRYGSRGL ATAGMVLVGI
GFLALTALPY NFSYPVFGAI IFMMGVGNGM FASPNTSSIM SSVPAKHRGA ASGMRSTLQN
TGQTVSIAIF FTIVILSLSS SLGPSLAHAL AQAGAPQLSP YVQKVPVTGA LFAAFLGYDP
VKALLGTLPA SVASQIPSSA ISIMEQRTWF PSAIAPSFML ALRETFYFGA ALSFIAAVAS
ALRGKAKIPE EVVQYDAEKT RR
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