| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1279 |
|---|
| Symbol | |
|---|
| ID | 5104691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | - |
|---|
| Start bp | 1255858 |
|---|
| End bp | 1256310 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640507169 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_001191362 |
|---|
| Protein GI | 146304046 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCAGA GAAAACTAGA CGTTGAAGTA CTCGTGAGGA TCTCCAGGGT CTACCGAGCG
GTGAAGAGGG AGTTCAACAG GAGGCTTGAA TCGCGTGGAC TCAACTACAT AGACTTCCTG
ATCCTCATGA CCGTGAAGGA GTCCCCGAAG TCCATGGTCT ACCTAGCTAA GGAGGTGCTG
ATGACGCAGG CTGGGATCAC GGCAGCCATA GACAGGCTAG AGGAGAAGGG GTTAGTCAAG
AGGGAGAGGG ACAAGGAGGA TAGGAGGATC ATTAACGTGC AGATCACAGA AAGTGGAGTT
AGGGCAACTG AGGAGGCAAT GCAGGTCTAC GAGGAGATGG CCTCAGAGCT CATGAGGGAT
TTGGGCGTAG AGGAGAAGGA GAAGCTGATT GCTTTACTGG ACATTCTCCA GGAGAAGATC
CTGCGCCAGG AGAAGATGGC CCAGCAGTCA TGA
|
|---|
| Protein sequence | MMQRKLDVEV LVRISRVYRA VKREFNRRLE SRGLNYIDFL ILMTVKESPK SMVYLAKEVL
MTQAGITAAI DRLEEKGLVK RERDKEDRRI INVQITESGV RATEEAMQVY EEMASELMRD
LGVEEKEKLI ALLDILQEKI LRQEKMAQQS
|
|---|
| |