| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1277 |
|---|
| Symbol | |
|---|
| ID | 5104157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1254848 |
|---|
| End bp | 1255279 |
|---|
| Gene Length | 432 bp |
|---|
| Protein Length | 143 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640507167 |
|---|
| Product | HEPN domain-containing protein |
|---|
| Protein accession | YP_001191360 |
|---|
| Protein GI | 146304044 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2250] Uncharacterized conserved protein related to C-terminal domain of eukaryotic chaperone, SACSIN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGGCG TAAAGGTACA GACGTTGAAA CGAAGGGCTT TGCAATTCCT TAAGGACGCG
AGGCGGGACT TAAATGAGGG TATCTACGAT CTTGCAGTAT TTTACGCGGA ACAGGCTATT
CAACTTTACG TGAAAGCTAT CCTTTTCGAA ATGTTTGCGT CTGAAATTAA ATCACATGAA
ATAAGGAGTT TGATCTCATC CTTATCTAAA CTCTTGAGAG AGAACGGGTA TCAAAATCTA
GCAAACGACC TCGATAATCT CGTGAAAAAG TTCAGGAAGG AGCTAATCGA TCTAGAAGTT
GCTTACATAG ATTCGAGATA CGAGGACATT GAATATGATA AGGAGACCAC TGAGGAGATA
CTCAACGTGG CCATGAACAT AATAAATGAG CTGGAGGAGA TTAGCAAGAA TGTCAAGCTG
GGTAAAGGAT AG
|
|---|
| Protein sequence | MSGVKVQTLK RRALQFLKDA RRDLNEGIYD LAVFYAEQAI QLYVKAILFE MFASEIKSHE
IRSLISSLSK LLRENGYQNL ANDLDNLVKK FRKELIDLEV AYIDSRYEDI EYDKETTEEI
LNVAMNIINE LEEISKNVKL GKG
|
|---|
| |