Gene Msed_1268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1268 
Symbol 
ID5104681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1243236 
End bp1244216 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content54% 
IMG OID640507159 
ProductNAD(+) kinase 
Protein accessionYP_001191352 
Protein GI146304036 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0061] Predicted sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATG CCGTGAAGAG GGTCCTCCTC CACGGGGAGG GGGACGGCAG AACAAGGGAG 
AGGGTGAGGA GACTCCTGAG GGAGTACGGG ATTCAGGAGG TTTCAGAGGG TTACGACGCA
GTGATAGAGG TGGGAACTGA CGGGGATCTC CTGAAACTCC TCCAGATACT AGGCGCTCCC
AAGGTTCCAG TGTTCCACGT GAGCCCTCCA GGTTACTCCA CCTTCTACTC CTCGGTGGAC
TGGGACCAAC TCAGGCCCGG GTTAGAGAGG CTTTCCATGG GCGATTATCG CGTGGAGCAA
CTCACGAGGT TAAGGGTTTG TGTCGGGAAT AACGAGCCAG TGTACGCCCT TAACGAGCTC
GCGCTCTTCC CCTCTAGGAG TGCAACTCTC ATGGAGTATT CCCTCGTCGT TGATGACGAG
GTCCTGTGGA GCGATAAGGC TGATGGTATC ATTGTGGCCA CGCCTGCAGG ATCAACCGCC
TACGCTTTCT CCGCCGGAGG TCCCATGGTT CTGAAGGGGG CCCCCGTGTT CGTTCTAGTT
CCCGTGAATT CCCTAAACCC CATAAGGAGA AGTCTTGTGG TTCCAGACGG GTCGAGGATG
GTGATAAGGG ACATCTCAAG TCAGGTGAAC GTTGAGGCAA TCCTCGATGG GGTCGCTAGG
GTCAGGGTGA ATGATGCGGT CACTGTGGAG AGAGGAGAAT CAATATCCCT CATTAGGTTC
ACCGAGAAGG TTGGAGAGAA CATCGAGAGG AAGGTAAAGC TTACCCTCGA AAGTCAGGAC
ATACCACCAA GTGCAAAGTT TGTGTTAAAG ATGCTTCAGA TTTACGGTGA GGCCACACCG
AAGGAACTAG TGGAGAAGAC GGGTCTTCCA GACAGGACCA TAAGGTACGC CCTCTCAATT
CTCGTAAAAA AGGGGATTGT GAAAAGAGTT GCGAATCCTC GAAACATTCA GCAGAGAATC
TACAGAGTCA GTAGAGCATG A
 
Protein sequence
MPDAVKRVLL HGEGDGRTRE RVRRLLREYG IQEVSEGYDA VIEVGTDGDL LKLLQILGAP 
KVPVFHVSPP GYSTFYSSVD WDQLRPGLER LSMGDYRVEQ LTRLRVCVGN NEPVYALNEL
ALFPSRSATL MEYSLVVDDE VLWSDKADGI IVATPAGSTA YAFSAGGPMV LKGAPVFVLV
PVNSLNPIRR SLVVPDGSRM VIRDISSQVN VEAILDGVAR VRVNDAVTVE RGESISLIRF
TEKVGENIER KVKLTLESQD IPPSAKFVLK MLQIYGEATP KELVEKTGLP DRTIRYALSI
LVKKGIVKRV ANPRNIQQRI YRVSRA