Gene Msed_1250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1250 
Symbol 
ID5103863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1227754 
End bp1228041 
Gene Length288 bp 
Protein Length95 aa 
Translation table11 
GC content52% 
IMG OID640507141 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001191334 
Protein GI146304018 
COG category[C] Energy production and conversion 
COG ID[COG2440] Ferredoxin-like protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCG AGGAGAAACT TTACACCCTT AGGTACAAGA GGGACGAAGA ACCGCATCTG 
AGGATAAGGG ACCAGGCACA ATGTGCCAAG TGTGAACAGG AGTATGGAAC TCCGCAACCC
TGCATATCAG TCTGCCCTGC CAACGTTTAC ACGTGGGACG GACATAAGCT TGTGCTATCC
TACGAGAACT GCGTAGAGTG CGGTGCCTGC AGGATTGCGT GTCCCTTCCA CAACATAGCC
TGGAGTTACC CAAGGTATGG CCTTGGAATG TCCCTCAGGT ACGGGTAA
 
Protein sequence
MRVEEKLYTL RYKRDEEPHL RIRDQAQCAK CEQEYGTPQP CISVCPANVY TWDGHKLVLS 
YENCVECGAC RIACPFHNIA WSYPRYGLGM SLRYG