| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1243 |
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| Symbol | |
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| ID | 5103856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1221031 |
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| End bp | 1222632 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507134 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001191327 |
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| Protein GI | 146304011 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1032] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.445572 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACAAT ATATGAAAGT CGTTTTCATA CGCCCCAGTA ATCCAACTGG GAGTGGATAT
CTCAGATCCT TTGGATTCCT CCCCGTTCCC CTAGGTTTGC TACAACTAGC TGGCGATGTG
AGGGCGACGG GGAATCATGA GATCAAGATC ATAGACATGG AGGCTGATCA GATGTCCATC
CAAGACGTGA TCAACGACAC CGTTAGATTT AATCCAGATA TTGTTGGGCT AACACTCCAC
GCCACCGCTG CCCATAACGT GTCTGCGTCC ATAGCCAAGG GAGTAAAGGA GATGAAGCCT
GACGTAATTA CCCTGGCTGG AGGTCATCAC GCTACGTTCG TCCCTGAGGA GATGCTGAGA
AGTAACTTCG ACGTTGTAGT GATGGGGGAG GGCGATGAGA TTATGATGGA GTTGGTTAAC
GTGCTCGAGA ACAACGATGA CTTGGGTAAG GTGAAGGGAA TAGTATACAG GGATAAGGAA
GGGAACATTA AGAGGACACC GCCCAGGCCA CTCATAAAAA GTTTAGATAA GCTTCCCATG
CCGGCCTTCG ACCTAGTGGA TAGGGAAAAG TACACCTTTG ATGTATTTGG TAGGAACGAG
ACAGTAGCCT GTATGGAGAC CAGTAGGGGA TGTCCCTACG CCTGTGAGTT CTGTTCCGTA
ACCCCTACCT GGGGGAACTC GTGGAGAAAC AAGTCCAATG AGAGGATACT CAAGGAACTC
TCGGAGATAA AAAGACTAGG TTACAGCTGG GTGTTCTTCA CGGATGACAT CTTCGTGGTT
CAGCCCAACA TAAAGGACAG GATGAAGCTC TTCGACCAGA TGATGGAGAT GGGATTAAGT
ACCAACTTCA TAGCCCAAAT GAGGGTTGAC ATTACTGCGA AGAACCCAGA GGTGATTAAA
AAGGCCTCAG ATGCTGGGCT AAGAATAGCT TTCCTAGGGG TGGAATCAGG GGACGACGAG
ACCCTGAAGA AACTTCATAA GGGAACAGTT ACGTCTTTGG CGGAGAAGGC AGTCAAGGTT
CTTCATGAGA ATGGGGTAGT AGTCCTAATA GGCCTAATAC TCGGTGCACC CTACGATACC
TTCAAGAAAA TGATGAAGAC CATAAGGTTT GCCTACAGGC TATCCGATCT TGGGGCTGAT
AGCGTTCAGT TCAGCATATA CACTCCACTA CCTGGGACCA GGGTTTTCGT TAAGGCGCTT
AAGGAGAAGA GGCTGTTCAC CCTAAATTGG GACTACTACG ATATCCTGCT TCCAGTTATG
AAAACAAAGA GTAACCCCCT ACTTGTCCAG TTCCTTCAAT ATTACGGTAA TTACACCTTC
TACGTGAGGA AGTGGATAAG GAGCAAGTTC GTGCGCGATA AGGTTCCTGA GAGGAAAATG
GAATTGTTGA GGAGGGCCGA GAAGTATTTC GCCGGAAAAC TGGGACATTA CATGAAGGAA
ATAGTCGTGA GCCTTCCCGT GGGATTAATC AAGACGGCTA GGCTAATGAG GCAGGAATCT
CTTCCTCCAG ACGAGAAATT GCAGGAACTT ATAGCCTCTA GTAAGGTTAT AGTGTACAGT
GAGACCGAGG ACAAGAGGAA CAAGTACTTT TCCATAGATT AA
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| Protein sequence | MKQYMKVVFI RPSNPTGSGY LRSFGFLPVP LGLLQLAGDV RATGNHEIKI IDMEADQMSI
QDVINDTVRF NPDIVGLTLH ATAAHNVSAS IAKGVKEMKP DVITLAGGHH ATFVPEEMLR
SNFDVVVMGE GDEIMMELVN VLENNDDLGK VKGIVYRDKE GNIKRTPPRP LIKSLDKLPM
PAFDLVDREK YTFDVFGRNE TVACMETSRG CPYACEFCSV TPTWGNSWRN KSNERILKEL
SEIKRLGYSW VFFTDDIFVV QPNIKDRMKL FDQMMEMGLS TNFIAQMRVD ITAKNPEVIK
KASDAGLRIA FLGVESGDDE TLKKLHKGTV TSLAEKAVKV LHENGVVVLI GLILGAPYDT
FKKMMKTIRF AYRLSDLGAD SVQFSIYTPL PGTRVFVKAL KEKRLFTLNW DYYDILLPVM
KTKSNPLLVQ FLQYYGNYTF YVRKWIRSKF VRDKVPERKM ELLRRAEKYF AGKLGHYMKE
IVVSLPVGLI KTARLMRQES LPPDEKLQEL IASSKVIVYS ETEDKRNKYF SID
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