Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1237 |
Symbol | |
ID | 5103851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | + |
Start bp | 1216460 |
End bp | 1217152 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640507129 |
Product | hypothetical protein |
Protein accession | YP_001191322 |
Protein GI | 146304006 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGAAA TTAAGGCTAC TGACGACGAG CTCAAGAGAA TTTACGAGGA TATACCTTCC AGTTACGATA GGGCAAACAG GTTCATCTCC TTCAATCAAG ACGTTAGATG GAGAGCCAAT CTAGTTAAGA CTGCATTGAA GTTCTGTCCC AATCCAGGGT CAGTCCTCGA TGTCGCATCA GGTAAGGGAG AGCTCACATA CGTTCTTAGG AAGTTCACCC AAGCCTACTC AGTGATGGTG GATTACTCAG AAAACATGTT GAGGCACTCC CTGGTGGAGG GAGATAGGAT TCAGGGCTCT TTTGACGCGC TCCCCTTCAG GGATAATTCC TTTGACCTTG TGATGAGTAG TTTCGCGCTT CACGCCTCAG ACAACGTTGA AGCGGTGGTG AGGGAGATGG AGAGAGTCTC TCGTCATGTT CTAGCGTTCA TTGCCATGGG GAAGCCCGAT TCCGTGTGGA AAAGGGCTTA CGTTGGATTT TATCTTCATT ACGTGATGCC ATACATTGCC GCGTTGGGTG GAGCCAAGGC CAGCGATTAC AGGTACATCT ACTATATTTT CAGGAGGTTG TACACTAACT CGTACTACAG GCAACTGTTC TCTAGACTGC TGAACCTTAG GGTTTACAGG GAGTTAGCAC TCAACCTGTT CTACTTTGTT GTGGGAGAGA AAAGGGGAGA AGACGAGAGC TAA
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Protein sequence | MQEIKATDDE LKRIYEDIPS SYDRANRFIS FNQDVRWRAN LVKTALKFCP NPGSVLDVAS GKGELTYVLR KFTQAYSVMV DYSENMLRHS LVEGDRIQGS FDALPFRDNS FDLVMSSFAL HASDNVEAVV REMERVSRHV LAFIAMGKPD SVWKRAYVGF YLHYVMPYIA ALGGAKASDY RYIYYIFRRL YTNSYYRQLF SRLLNLRVYR ELALNLFYFV VGEKRGEDES
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