| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1197 |
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| Symbol | |
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| ID | 5104493 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1168127 |
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| End bp | 1169578 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640507089 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001191282 |
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| Protein GI | 146303966 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0630] Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.585907 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAGC CGAGAGACGT CAAGGTAATA AGACCCAAGT ATCAGGGCGA TATCATCCAG
GAGTACGACG TCAAGGGGGT TTACCCCGAT TACGATGTTG CCTTCCCCAA GGTTAAGATC
ATCAGGAACC AAACTGACGT GTATTACGAC ATTGAGGAGC CCAACATAAA CCAGTCCCAA
CTTGAGCTCC TGAAGAAGGC GCACAAGGCA CTCTACTACA CCCTCAAGCC CTCTGAGGTG
GACCGCCTGG TCACCTCCTA CCTAGACTAC GTTGGTAGGG ACAAGGTTAT AGGCTATTAC
GTGGTCAGGG ACATCTTAAG ATATGACGTC CTCACAACCC TCCTAGACGA CGAGCAGATA
GAAGATGTGT CCTACTCTCC CACCGCCCCA TCCTCACCCG TGTTCGTGTT CCACAGAGGG
TACGGAACCT GGATCTCCAC TAACGTGATC CTTGACTCCA GCGAGGCCAA CTATCTGGTT
CAGAAGATCG CCTTCAAGAG CGGTAAATCC ATCACCCTAG CTAGGCCAAT CCTAGACGCC
ATGACCCCTG AGGGTTACCG TATTGCTCTG ACCTACGGAA GGGAGGTCTC TCCCACTGGC
TCAACTATCT CCATAAGGAA GCCGATCAAG GAGGTCTGGA CTCTCCCCTA CATGGTAGTA
AGGAGGAGGA TAATGCCACC CCTCGTAGCC TCAGCGCTCT GGTTCGTCCT TCAGAATCGC
GGTGTCATAC TCGTGGTCGG GAGATCTGGT TCGGGTAAAA CGACCCTGAT CAACGCCTTG
CTCACAGTTG CCCCACCCTC CTGGAAGATA GTCACGGTGG AGGAGATACC AGAGCTAAGG
GTAATCTACC CCAACTGGGT GAGGCTTGTG TCCAGGAAGC CAACCCTAAT GACCGAGTAC
AGTGAGTCTG CTGAGATTCC ACTGGATCGA CTCATCTCCC ACACCTTCAG GGTTAGGCCC
GACCTGGTCT CGGTGGGTGA GGTAAGGTCT AAGGAGGAGA TAAGGGAGTT CATTCACTCA
GTAGCTGCAG GTCACGGTGG AATCACTTCG CTACACGCTG AGGACTTTGC CTCCCTAAAG
GCTAGGTTCA ACTATGCTGG GGTAGACGAC TCCTTCTTCG CGATTGTGTC CATGGTGGTA
TTCGTGAACT CCTACAACGT TAGTGGTAAA CTAGTAAGGA GGGTCCAGGA GGTCGGTGAG
GTAGTCCTGA GGGACGGTGA GGCACATTAC GTTCCGCTTG CGACCTACTC TCCCGTGTCT
GACTCTTACG TGGTGGACAT ACTCCACAGC AAGAGGTTAA TGACCATGGC CTCACTCAAG
GGTTACACTG AGGGAGATCT TAAGGCAAAC TTAGAGAAGA AGGTTAAGTT TATGCTAGAG
ACCGCCGGTC TACCGCAACC TGAATACGAG AAAAGGATAA GGTCCTACTA CGAGGAGGAG
GGTATAGTAT GA
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| Protein sequence | MMEPRDVKVI RPKYQGDIIQ EYDVKGVYPD YDVAFPKVKI IRNQTDVYYD IEEPNINQSQ
LELLKKAHKA LYYTLKPSEV DRLVTSYLDY VGRDKVIGYY VVRDILRYDV LTTLLDDEQI
EDVSYSPTAP SSPVFVFHRG YGTWISTNVI LDSSEANYLV QKIAFKSGKS ITLARPILDA
MTPEGYRIAL TYGREVSPTG STISIRKPIK EVWTLPYMVV RRRIMPPLVA SALWFVLQNR
GVILVVGRSG SGKTTLINAL LTVAPPSWKI VTVEEIPELR VIYPNWVRLV SRKPTLMTEY
SESAEIPLDR LISHTFRVRP DLVSVGEVRS KEEIREFIHS VAAGHGGITS LHAEDFASLK
ARFNYAGVDD SFFAIVSMVV FVNSYNVSGK LVRRVQEVGE VVLRDGEAHY VPLATYSPVS
DSYVVDILHS KRLMTMASLK GYTEGDLKAN LEKKVKFMLE TAGLPQPEYE KRIRSYYEEE
GIV
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