| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1190 |
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| Symbol | |
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| ID | 5104486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1162280 |
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| End bp | 1163134 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640507082 |
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| Product | transcriptional regulator, TrmB |
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| Protein accession | YP_001191275 |
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| Protein GI | 146303959 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2512] Uncharacterized membrane-associated protein/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.280111 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTCGA TGAGATATCT TGGCCTTCTG ATGCTCCTAA CATTAGCGTC CTTGCTGACA
TACGGTCAGC AATCCGTTGT CATATATTAC AACGGAACCG TTGTGGCTCA TCTTAACAAC
GTGTCCACAT TTCACGTTAT AGGAGATAAC ATCACAGATC TTCGGGTTAT AGGTTCGAAG
TTTAATCTTA CTGGAGGTTA CCTATTCTTC TATAATACAT CTCGGGTCAC GGTGATCTAC
GTTGCCAGTT TCCCCAAGGG CGTAATCCAG GGAACAGAGC CCTACAACGT TACCTTCAAC
GTCATTGTTC CCGGAACCTA TACCTTTGCC TATATATACC CGCCACCCAC ATCATTGGAA
ACCAGGGGAA ACCTATACAA CCTAACTTTG CAGGGTAGCT CTCTAGAGGT GCTTTACTCC
ACATCTTCTC AAAGCTCGAG TGGATTCGGT AAGGAGGATC TAATAATCTT AGTCGTTGTT
CTGGTTACTG ATGCCGTTGT TGGTTTCTTC CTATATGAAT ATTTCAGGTC TAGGAGGAGA
CCTGTGACTG AGCAGGTGAA CCAGAACCAA CAGATGAGCC AAGCACAAGC GAGTCAGACT
GTCGAGGAGG ATGAGAAAGA GGAGGAGGCG GAGCTCACAA CTCAGGAGCT CAACGATCGT
GATATAATGG TATTGGAGTC CTTCAAGAGG GGAGCAAGAA CCCTATCAGA CGCAGTCCGA
GACACGGGAC TACCCAAGTC CACCGTTTAT AGAAGGATCA AGAAGCTCGT GAAACTAGGT
TACCTTGTGG AGAGGAGGGA AGGTGGGAAA ATCTGGTATG AGGTGTCCCA ACCACCTCCC
GATAAGCCAA CCTGA
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| Protein sequence | MYSMRYLGLL MLLTLASLLT YGQQSVVIYY NGTVVAHLNN VSTFHVIGDN ITDLRVIGSK
FNLTGGYLFF YNTSRVTVIY VASFPKGVIQ GTEPYNVTFN VIVPGTYTFA YIYPPPTSLE
TRGNLYNLTL QGSSLEVLYS TSSQSSSGFG KEDLIILVVV LVTDAVVGFF LYEYFRSRRR
PVTEQVNQNQ QMSQAQASQT VEEDEKEEEA ELTTQELNDR DIMVLESFKR GARTLSDAVR
DTGLPKSTVY RRIKKLVKLG YLVERREGGK IWYEVSQPPP DKPT
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