| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1184 |
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| Symbol | |
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| ID | 5104480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1154882 |
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| End bp | 1155286 |
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| Gene Length | 405 bp |
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| Protein Length | 134 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640507076 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001191269 |
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| Protein GI | 146303953 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1848] Predicted nucleic acid-binding protein, contains PIN domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.681973 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGCAGAAGA ATAAATATTT CATAGATAGT AATATTTTCT TTTATGCAAA GATAGGCGAT
AGGAAATACG GTGAGTGCTC TAAGAAGGTG ATCCGCAAAA TCTACGAGGG AGAGGCTGAA
GGCCATGTGG ATGTCTTAGT GTTGTTGGAA GTTGCGAACG CTTTAAGCAA GTTCCACATG
AAACGGGAGG AGATTACTAG GGAAATCACG GCCATAATCT CGTTGCCTAT CAACATTGTG
GACGTGTCGA AGGAGGACAT AGTTGAAAGT TCCGAGATCG ATCTGAAACC CTATGACGCC
CTACATTATT ACGTTTCTAG GAAAATAGAC GCAAGAATTA TCTCCGCGGA CAGTGATTTT
GATAAATTTG GAAGAGTCGA TCCATGTGAA ATTGACAAGA TATAA
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| Protein sequence | MQKNKYFIDS NIFFYAKIGD RKYGECSKKV IRKIYEGEAE GHVDVLVLLE VANALSKFHM
KREEITREIT AIISLPINIV DVSKEDIVES SEIDLKPYDA LHYYVSRKID ARIISADSDF
DKFGRVDPCE IDKI
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