Gene Msed_1176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1176 
Symbol 
ID5104472 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1145873 
End bp1146307 
Gene Length435 bp 
Protein Length144 aa 
Translation table11 
GC content52% 
IMG OID640507068 
Productcarbon monoxide dehydrogenase subunit G 
Protein accessionYP_001191261 
Protein GI146303945 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.551592 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTCA GGAGCGATCT AAGGATTAAA GCGGAGAGGG GGAGGGTCGA GGAATTGTTG 
TCGAGTCCCT CCCGGTTTGC TGAGTGCCTT CCCGGAATAC AGGAGTATGA GGTTAAGGGG
GATGAGTTTA GGGCAGTCTT TAAGTTAGAC GTCTCAGACT TGACCCCACA CATCTCCTCC
TTGACCGTGG TCGCCAACTC CAGGTTGACT AGGGAAGGGC AACGGATCCT CGTGTCTGGG
ACTGGGAGGT CCGCTGGCGT GAACATAAAG TTCGCGATAA ACGTTGAGAT TGTGGATGAC
AGGGAAGGAA CTAGGATTGT CTGGGACGCG AACCTAAACC TAGGGATCCT AGAGAGACTC
CTTGGGAGTA GCGTTGGAAG GATTGCTGAG GTCAACGTGA AGAAGATAGT GGAGTGTATT
TCAAGGAAGG TTTGA
 
Protein sequence
MELRSDLRIK AERGRVEELL SSPSRFAECL PGIQEYEVKG DEFRAVFKLD VSDLTPHISS 
LTVVANSRLT REGQRILVSG TGRSAGVNIK FAINVEIVDD REGTRIVWDA NLNLGILERL
LGSSVGRIAE VNVKKIVECI SRKV