| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1164 |
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| Symbol | |
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| ID | 5103512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1129345 |
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| End bp | 1129980 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640507056 |
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| Product | hypothetical protein |
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| Protein accession | YP_001191249 |
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| Protein GI | 146303933 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00846992 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCTTCC GTGTCTGGAT CAAAAACCTA AGTTCGCTCA CCATAGGCGG TTCAACTGAT
CTAGGGGAAG TTGATATACC CATGAACAGG TTCCAGTTCC CCGGTTCCTC CTTGAAGGGT
GCCATGAGAT CTTCGCTTCA CAGGGCTATT CTAGAGTGGG GTGAAGAGCT GGAAAAGATG
GGGTACAAGC TCACGTCCTG TGGCGAGATT GACCCTGATT TCATTGAGAA GGCCCATCAA
GAGAGGCCAT GCGATGTATG TTCGCTTTTC GGTAGGCCAT CTCTTGGCGT TGAGGGTAGA
AGCAAGGTCA CGGTGATCCG CGATGAAGAA CAGGAAAAGA AGGTGTACAA GTTGACTAGG
GTAGGGATAG ACAGGAAAAC TAGGGTTAAA AGGAATGCAG CTCTCTTCTC GCAGGAGGTC
TTCAAGCCTG GTGAGGTCTT CAGCTTCAGG GTAGAGGTCA GCGACGATCC AAGGGAACTT
TCGTTGGTTT TACTTTCACT TCTCTACCTA AGATACTGGA GGCTTGGGAG GAGCGGAATG
GTTGACGTAA AGGTGGAGAA CCCGTGCAGG GGGCAGTGCG ACGAACTTGG GAATAAGCTA
GCCAATAGGT TGGAGGAGTG GGAGGTGGAA GAATGA
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| Protein sequence | MIFRVWIKNL SSLTIGGSTD LGEVDIPMNR FQFPGSSLKG AMRSSLHRAI LEWGEELEKM
GYKLTSCGEI DPDFIEKAHQ ERPCDVCSLF GRPSLGVEGR SKVTVIRDEE QEKKVYKLTR
VGIDRKTRVK RNAALFSQEV FKPGEVFSFR VEVSDDPREL SLVLLSLLYL RYWRLGRSGM
VDVKVENPCR GQCDELGNKL ANRLEEWEVE E
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