| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1147 |
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| Symbol | |
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| ID | 5103495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1093126 |
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| End bp | 1094034 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640507039 |
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| Product | CRISPR-associated Cas1 family protein |
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| Protein accession | YP_001191232 |
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| Protein GI | 146303916 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1518] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR00287] CRISPR-associated endonuclease Cas1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.253731 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACTCAC TCGTCATCTC GGATTACGGG AGTTACGTTA CCGTGAAGAG GGGAATGTTC
CTAGTCTCGC GAAAGGTTAA CGACAAGGAG GAGAGGAGGG AGGTATCCCC GAGCGAAGTT
GATGAGATTC TGTTCTGCTC CACGTCTTTG GTCTCAACCC ACGTGTTAAG GGTGGCCTTG
TCAAGGGGAA TAACGGTTGC CTTCCTGGAC TCAAGGGGGC AGATCTGGGG CCTCCTCCTC
CCCTCAGTGG TTACGGAGAC CGTGAGGACA AAGAAGGCCC AGTATGAGGC AGTTGCCTCT
GGACTGGATT ACGGGAAGGA GATCATAAGG GCGAAGATAA ACAACCAGGT GGTCCATCTC
AAGTATTGGG CAAGGAGAGG GGTAAAGACG GATTACCGTG AGCTTGAGGG AAAGGATGAG
GCCACTGCTG CAAGGATTTA CTGGCAGAAC CTGTCTCAGG TTGTCCCTGG CTTTCGCGGA
AGGGACGTTG AGGGAGGGGA TGGATTCAAC TCAGCGTTGA ACTACTCCTA CGCTATCCTG
TACTCTCGGG TAATGAGGGC CCTAGTCCTA GCGGGTCTCG ATCCCTACCT GGGATTTGTA
CACAAGGACA GGCCAGGTAA TGAGAGTTTG GTCTACGACT TCTCGGAGAT GTTTAAGCCC
TACGTGGACC TGGTACTGGC TAAGGCTTTC AAGGATGGTC TAGAGGTGAA GTTGAAGGGA
GGCCTCATGG ACAAGGAAAG CAGGGGAGCA GTTGCTAAAC TCGTGGTAAA GGGCCTAGAG
GAGAAGGTTA AGGAGGAACT TGACCACAAC CCCAAGAGCT TGAACCAGGC GATACGGGCT
CACGCCTTGA AGTTTGCTTC TGCGTTGAGG GAAAAGAGGG AGTATAGGGG GTTCAGGATG
GTGGTTTGA
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| Protein sequence | MNSLVISDYG SYVTVKRGMF LVSRKVNDKE ERREVSPSEV DEILFCSTSL VSTHVLRVAL
SRGITVAFLD SRGQIWGLLL PSVVTETVRT KKAQYEAVAS GLDYGKEIIR AKINNQVVHL
KYWARRGVKT DYRELEGKDE ATAARIYWQN LSQVVPGFRG RDVEGGDGFN SALNYSYAIL
YSRVMRALVL AGLDPYLGFV HKDRPGNESL VYDFSEMFKP YVDLVLAKAF KDGLEVKLKG
GLMDKESRGA VAKLVVKGLE EKVKEELDHN PKSLNQAIRA HALKFASALR EKREYRGFRM
VV
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