| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1127 |
|---|
| Symbol | |
|---|
| ID | 5103599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1056935 |
|---|
| End bp | 1058860 |
|---|
| Gene Length | 1926 bp |
|---|
| Protein Length | 641 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640507020 |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_001191213 |
|---|
| Protein GI | 146303897 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.814296 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGTGCA GGGTTGCAAT TGACGTTGGT GGGACATTCA CAGACTTCAT AGCCCTAGTG
AACGGGGAGA TAGTCACGGT AAAGACTCTA ACAAATCCAA CGAGGCCCTC TCAAGTCATT
AAGGACGTCC TGTCCTCGCT TGGATGTGAG GTCACGGAGG TCGTTCACGC GACCACTCTC
GCTACCAACG CCCTCCTGGG ACAGGAGAAA CTGGATCTCC CGAGGACGGC GCTCCTCACA
ACTAGGAGTT TCAGGGACGT GATAGAGATA GGGAGGCAGA ATCGACCCCG TCTCTACGAC
CTCAACTTCG AGAAGCCGAG GCAACTGGTA CCAAGGGAGT TGAGGGTTGA GGTTCAGGAG
AGGGTTGACG CTCAGGGTAA CATACTAGAA AGAGTTGAGG AGTCCGAGAT CGAGAAAATT
GCCCAGAACC TAAGGGAAAG AGGCGTTGAA TCCGTCGCGA TCAGTTACCT TCACTCTTAC
CTTAACCCCA CTAACGAGAT CAGGACTGGG GAAGTCCTCT CTCGTCACTT CAGGTTTGTG
TCCCTTTCCT CTGAGGTCGC CCCTGAACCG AGGGAGTATG AGAGAACCTC CACCACCGTG
GTTAACGCTG TCCTCATGCC CCTGATCTCC TCGTATCTGC AGGAACTCAA CTTCCTTCCC
TCCTTTCTGG TAATGTCAAG CTCAGGTGGC CTAGTTGACG TGGAGGAGGC CTCAAGGAAA
CCTGTCCAGC TCGTGGAGTC GGGCCCAGCC GCAGGGGTGA TAGCCTCAGC CTCCCTCTTT
CCAGGTAACG TGATCAGCTT TGACATGGGC GGGACCACGG CGAAGGCTGG GGTCGTCATC
GACGGAAAGT TCGAGATCAC GACCGAGTAC GAGGTAGGTG GTGAGGTTCA TCACGGCAGG
GTGGTGAAGG GTAGCGGTTA CCCCGTGAGG TTCCCCTTCG TGGACTTGGC AGAGGTCTCA
GCTGGAGGAG GGACGGTGAT CTGGAGAGAC GACGCTGGGG CCTTAAGGGT TGGTCCCTTG
AGTGCAGGGG CAGACCCAGG TCCCATGTGT TACGGAAGGG GAGGTGATAA GCCCACGGTG
ACGGACGCAA ACCTTGTCCT GGGAAGGGTG GGGGAGGTGA TCGGTGGAGG GATGAGGCTA
AAGCCCGAGT TGGCGAGGAA GGGGCTATCC AGGCTCGGTG ACCTGGAGGA CGTGAGTAGG
GATGCCCTTG CCCTGGTAAA CCTGGAGATG GCCAGGGCCA TAAGGCTTGT CACGGTGGAG
AGGGGGCTGG ATCCTTCAAG CTTCAGTCTC GTGGCCTTCG GTGGGGCTGG GCCACAGCAC
GCGGTTTACC TGGCAGAGGA ACTGGGAATT TCCAAGGTGT TGATTCCACC TTACCCTGGG
TTGTTTAGTG CCCTAGGCCT CCTCCTGGCT GACTGGCGCT TTGAGGCTAG GAAATCCTTT
CCCAGGGACC TCGAGGCCGA GTTCGTGAAG CTGGAGAGGG AGCTTTACGA CAGGTTGAAG
GGGAAGGTGG GTCACTTCCT CAGGTACGCT GACGTCAGGT ATCAGGGCCA GGGCTGGGAG
CTCACAGTCC CCGTGAACGA CGTCAACGAG ATCAGGCAAG TCTTTGAGGA GAAGCACCTC
TCAACCTACG GCTTCGTGAT GAGCGATAGG GAGATTGAGG TCGTGACCAT AAGGGTGTTC
GCCGTGAGAA GGAGACCCCT CCCACAGCTC TCAGTTGTGT CGGGGCAGGG GGACAGCCCC
GTCAAGAGGA GGAAGGCCCT CCTAGAGGAC GAGTGGGGTG AAGTGGACGT GTACGTTAGG
GAGAAGTTGA GGAGGGGGGT TAGGGTGAGA GGTCCCGCAA TCATAGAGGA GTTCAGCTCC
ACTACGGTGG TCAAGGACGG GTGGGAGGCC CTAGTAGACG AGTCCATAAC CTTGGTGAGA
CCATGA
|
|---|
| Protein sequence | MECRVAIDVG GTFTDFIALV NGEIVTVKTL TNPTRPSQVI KDVLSSLGCE VTEVVHATTL
ATNALLGQEK LDLPRTALLT TRSFRDVIEI GRQNRPRLYD LNFEKPRQLV PRELRVEVQE
RVDAQGNILE RVEESEIEKI AQNLRERGVE SVAISYLHSY LNPTNEIRTG EVLSRHFRFV
SLSSEVAPEP REYERTSTTV VNAVLMPLIS SYLQELNFLP SFLVMSSSGG LVDVEEASRK
PVQLVESGPA AGVIASASLF PGNVISFDMG GTTAKAGVVI DGKFEITTEY EVGGEVHHGR
VVKGSGYPVR FPFVDLAEVS AGGGTVIWRD DAGALRVGPL SAGADPGPMC YGRGGDKPTV
TDANLVLGRV GEVIGGGMRL KPELARKGLS RLGDLEDVSR DALALVNLEM ARAIRLVTVE
RGLDPSSFSL VAFGGAGPQH AVYLAEELGI SKVLIPPYPG LFSALGLLLA DWRFEARKSF
PRDLEAEFVK LERELYDRLK GKVGHFLRYA DVRYQGQGWE LTVPVNDVNE IRQVFEEKHL
STYGFVMSDR EIEVVTIRVF AVRRRPLPQL SVVSGQGDSP VKRRKALLED EWGEVDVYVR
EKLRRGVRVR GPAIIEEFSS TTVVKDGWEA LVDESITLVR P
|
|---|
| |