| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1125 |
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| Symbol | |
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| ID | 5103597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 1054839 |
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| End bp | 1055981 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507018 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_001191211 |
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| Protein GI | 146303895 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACATTC AGATTTTTCC CCTATCTATT CCATTTTTTA CTGATCCTGT GTCAGAATTT
TCTGATCAAT GGTCAGTGCA GTTATACGTG AAGGCAAGTT GGGATGACGT GAGTGGTTGG
GGAGAGACCG GCGTCTTCGG GAGCGGAATA CTAGGGGCCT ACGTCTCAAT CCTCAAGGAA
TTGATTGTCC CTCTTCTCAG TAGGTATCCC ATCACCTTAC CTTACGACGT TGAGACCTTC
CTAGAGAAGG TAATGTTAAC AGCGGGTAAC TGTGGAGTTG TTACGGGGGC CATAAGCTCA
GTGGAAATGG CCATGTGGGA CGCTAGGGCA AGGAAGCTTA ACACGTCCCT GGCGGAAATG
CTTGGCGGGA GGGTTAGGGA AAGGGTGCCC GTTTACGGCA GTTTCCCAAG GTTTAAGTCC
AGTGAGGATG TCGTATCCAC TGTAGTTAAG ACGACCGAGA GAGGTTACAA GATGATCAAG
TTGCATCAAC CTCCGTCCTC CGTGGTGGAG GACCTCCACG AGATCAGGGA GAAGATCGGA
TACGACGTGA AGGTTGCCCT AGACATGAAC GCTCCCTTCG ACCTGGAGAG CGCGAAGAAG
TTCGTGGACG CGGTGGCTAA ATACGAGGTG GAGTGGGTAG AGGAGCCCAT CTGGCCCTTG
GATGATTACG ATTCATTGAG AAAGCTATGC GATTACTCCC CTGTACCCAT AGCTGCAGGG
GAGAACGAGT ACACCATACA CGGCTTCAGG AGGCTATTGG AGACCGGAAT CGCCTACCTT
CAACCTGACA TAGCCAAGAT TGGGGGAGTA AGTAAGTTCC TGAAGGTTCT GGACTTAGCC
TCAGGTTATA ACGTGAAGGT TGCCCCGCAT GACAGGCCAG ATTCCTCACC GCTTTCCTTG
ATGTATGTCC TTCAGATCGC CTCCGCAAGG TCCGAAATTA GTATCATAGA GTTCACCATC
TCGGATTTTC CATCAGGTTT ATTCGAAAAC ATACCCAGAT TTCGTCACGG GACACTGGAG
GTTCCAGCGG GTCAAGGTAT TGGGCTCAAA GTTAAAGAAG ATCAACTAGA AAAATATTCT
TACGAGGAAA AACTAAGAAT ACTCGCCTTT AGCGACCTTG AAGCCAAACT AAGGGATAAA
TAG
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| Protein sequence | MNIQIFPLSI PFFTDPVSEF SDQWSVQLYV KASWDDVSGW GETGVFGSGI LGAYVSILKE
LIVPLLSRYP ITLPYDVETF LEKVMLTAGN CGVVTGAISS VEMAMWDARA RKLNTSLAEM
LGGRVRERVP VYGSFPRFKS SEDVVSTVVK TTERGYKMIK LHQPPSSVVE DLHEIREKIG
YDVKVALDMN APFDLESAKK FVDAVAKYEV EWVEEPIWPL DDYDSLRKLC DYSPVPIAAG
ENEYTIHGFR RLLETGIAYL QPDIAKIGGV SKFLKVLDLA SGYNVKVAPH DRPDSSPLSL
MYVLQIASAR SEISIIEFTI SDFPSGLFEN IPRFRHGTLE VPAGQGIGLK VKEDQLEKYS
YEEKLRILAF SDLEAKLRDK
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