| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1123 |
|---|
| Symbol | |
|---|
| ID | 5103595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Metallosphaera sedula DSM 5348 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009440 |
|---|
| Strand | + |
|---|
| Start bp | 1053365 |
|---|
| End bp | 1053652 |
|---|
| Gene Length | 288 bp |
|---|
| Protein Length | 95 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640507016 |
|---|
| Product | SAF domain-containing protein |
|---|
| Protein accession | YP_001191209 |
|---|
| Protein GI | 146303893 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2721] Altronate dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACGAG GTCTTATTCA TTCGGAAAAG GATGATGTGT GCGTGGCCAC CACAGACGTC
AAAAAGGGAG AGGAAGTTCT TTGCGCGTAT TTAGAGAACA ACTCTAAACA TGAGATAATC
AAGACCTTAG ATGATGTTCC CCTGGGTCAC AAAATAGCAC TCAGGGACAT AAGGCAGGGG
GAGAAGGTAC TAAAATACGG TAGGCCGATT GGTGTGGCCA CCACCAACAT ATCCAAGGGA
CAACATGTCC ATATTCACAA CCTCAAATCC ATAAGGTGGT CAAAATGA
|
|---|
| Protein sequence | MPRGLIHSEK DDVCVATTDV KKGEEVLCAY LENNSKHEII KTLDDVPLGH KIALRDIRQG
EKVLKYGRPI GVATTNISKG QHVHIHNLKS IRWSK
|
|---|
| |