| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1116 |
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| Symbol | |
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| ID | 5103589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1042968 |
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| End bp | 1043852 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640507010 |
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| Product | fumarase alpha subunit |
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| Protein accession | YP_001191203 |
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| Protein GI | 146303887 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.395574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCGG ATACTTTCTA TAGCCTTGTA GAGGAGGTAT CAGAAACTCT TTACTATAAG
GCCCTTACAG TCATTCCAAA GGACGTGGTT GAAAGAATAG GAAAGGCCTA CGAGATGGAA
CAAAGTGAGC TGGGAAGGCG AGTGTTGGAT ACGATAATGA AGAACATAGA GGTAGCGACC
AAAAGGAACC TACTTGTATG TCAAGATACG GGAACGCCAG TGTACTCCGT AGAGCTGGGA
GATTTCGAGA TCTCCCTTCC TAAGCTTAGG GATAGTATCG CGCGGGGCGT GAGGAAAGCT
ACGCTGAAGT ATCACTTGAG ACCCAACATG GTACATCCCA TTACTAGGGA AAACACGGGT
GATAACACGG GGAGAAGTTC ACCAATAATA CACTTTGAAA TCAACGAAGA ACTAAAGGAT
AAAATAAGAA TTACCGCCCT ACCGAAGGGC TCAGGCTCTG AGAATATGTC ATCCCTGAAA
ATGCTTAGGC CCGCGGATGG TATCTTGGGG GCGAAGAAGT TCGTGTTAGA GACCATAGCG
AACGCTGGAG GGAAGGGATG CCCTCCCTAC ATAGTGGGGG TAGGAATTGG AGGAGATTTC
GAATCGGTGT CTCACTTAGC TAAGAGGGCA GTTATGCGTC CTGTGGGATC CAGGAGCTCG
GACCCTGAGG GAGCTAAACT TGAGGAGGAG CTCTTCTACC TGGTGAATGG GTTGGGAGTG
GGTCCCATGG GTGTTGGAGG AAAGTTCACG GCCATAGGGG TTCACGTTGA AATTGGGGAA
ACACACATAA GTAGCTTGCC CGTTGCCGTG AACGTCCAGT GTTGGAGGGG AGAAAGGGCT
ACGGCTGAGG TAACCCTCGA CATGAAGGTT AACATGGGTG ATTGA
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| Protein sequence | MTSDTFYSLV EEVSETLYYK ALTVIPKDVV ERIGKAYEME QSELGRRVLD TIMKNIEVAT
KRNLLVCQDT GTPVYSVELG DFEISLPKLR DSIARGVRKA TLKYHLRPNM VHPITRENTG
DNTGRSSPII HFEINEELKD KIRITALPKG SGSENMSSLK MLRPADGILG AKKFVLETIA
NAGGKGCPPY IVGVGIGGDF ESVSHLAKRA VMRPVGSRSS DPEGAKLEEE LFYLVNGLGV
GPMGVGGKFT AIGVHVEIGE THISSLPVAV NVQCWRGERA TAEVTLDMKV NMGD
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