| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1110 |
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| Symbol | |
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| ID | 5104276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1037798 |
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| End bp | 1039021 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640507004 |
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| Product | IS605 family transposase OrfB |
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| Protein accession | YP_001191197 |
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| Protein GI | 146303881 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0675] Transposase and inactivated derivatives |
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| TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.48551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTAA GAGTCAAGGT TAATTACGCC ACCTACTCAG CACTCAAAGA AGTTGAGAAA
GAGTATAGAG AGGTTCTTGA GGAGGCAGTA AATTACGGGC TTGCAAAGAA CACAACGTCA
TTCACTAGGA TTAAGGCTGG GATTTACAAG ACTGAGAGGG AGAAGCACAG GGACTTGCCA
TCCCATTATA TTTACACCGC TTGTGAAGAT GCCAGCGAGA GGCTAGATAG CTTCAATAAG
TTGAAGAAGA GAGGAAGGAG TTACACTGAC AGACCGTCAG TTAGGAGGGT TACTGTTCAT
CTTGATGACC ACTTGTGGAA GTTCAGCCTC AGCGTGATTT CAATTGCTAC TAAGAGGGGT
AGAGTTTTCA TTTCTCCAAT CTTTCCAAAG ATCTTTTGGA GGTATTATAA CGACAATTGG
TTAATTGCTA GTGAGGCTAG GTTTAAACTG TTGAAGGGGA ATGTTGTAGA GTTCTTCATA
GTTTTTAAGA AGGATGTTAA ATCTTACGAT CCAAGGGGTT TTATTCCAGT TGATTTGAAT
GAGGGTTCAG TCTCTGTATT AATTAATGGG AAGCCGATAC TTTTAGAGAC TAACACTAGG
ATGATTACTC TGGGTTATGA GTATAAAAGG AGGTCGATAA CTAATGGTAG GTCTACTAAG
GATAGGGAGG TTAGGAGGAA GTTAAGGAAG TTGAGGGAGA GGGATAAGAA GCTTGATGTT
AGGAGGAAGT TTGCTAAGTT GATTGTTAAG GAGGCTTTTG GGAGTAGGAG TGCTATAGTC
TTGGAGGATT TGCCAAAGAG AGTTCCGGAG CATATGGTTA AGGGCGTGAA GGATAAACAG
CTTAGGTTGA GGATTTATCG TTCGGCATTT TCTTCAATGA AAAATGCTAT TGTTGAGAAG
GCTAGGGAGT TTGGTGTTCC CGTAATCTTG GTTGATCCTT CTTATACTTC TTCTATTTGC
CTTGTTCACG GGTCGAAGAT TATTTATCAA CCCGATGGGG GCTCTGCCCC AAGGGTTGGT
GTTTGTGGGA AGGGAGGAGA GAGGTGGCAT AGGGATGTTG TTGCGTTATA TAATTTGAGG
AAAAGAGCTG GAGATGTGAG CCCCGTGCCG TTGGGCTCGA AGGAGTCCCA TGACCCACCT
GTCGTTAAGG CTGGCAGGTG GTTGAGGGCT AAGTCCCTAC ACTTGATCAT GATTGAAGAT
AAAATGAGTG AAATGAAAGT GTAG
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| Protein sequence | MKLRVKVNYA TYSALKEVEK EYREVLEEAV NYGLAKNTTS FTRIKAGIYK TEREKHRDLP
SHYIYTACED ASERLDSFNK LKKRGRSYTD RPSVRRVTVH LDDHLWKFSL SVISIATKRG
RVFISPIFPK IFWRYYNDNW LIASEARFKL LKGNVVEFFI VFKKDVKSYD PRGFIPVDLN
EGSVSVLING KPILLETNTR MITLGYEYKR RSITNGRSTK DREVRRKLRK LRERDKKLDV
RRKFAKLIVK EAFGSRSAIV LEDLPKRVPE HMVKGVKDKQ LRLRIYRSAF SSMKNAIVEK
AREFGVPVIL VDPSYTSSIC LVHGSKIIYQ PDGGSAPRVG VCGKGGERWH RDVVALYNLR
KRAGDVSPVP LGSKESHDPP VVKAGRWLRA KSLHLIMIED KMSEMKV
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