| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1095 |
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| Symbol | |
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| ID | 5103569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | - |
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| Start bp | 1021515 |
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| End bp | 1022948 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640506990 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001191183 |
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| Protein GI | 146303867 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACTC TTCTCTCCCT AACCCTTATG TTAATGCTTG TGAACTACGT GGAGACCATG
GTGATTCCAG CACTGCCTAA GATAGAGGAC CAATTCTCCA CAACCGCGAC CACCGTGGCG
TGGGTAACCT CGGCATACCT CATTGTGGGG GCGGTCGCGT CTCCGATTTT CGGCAAACTG
GGCGACAGAT ACGGGAAAAA GAAGGTTTAC CTGATCTCAA TCGGGTTCTA CTCGCTTGCG
GTTTTGATGG CAGGTTTCTC TCCGAACATT TACTTCCTGA TCTTCTCTAG GGGAGTTCAG
GGAATAGGAT ATTCCACATT TCCCTTGGCT ATTGCCATCA TCACTGACCT GTTCCCCAAG
GAAAGGGTGG CATGGGCACA GGGCATACTT AGCGCAACCT TGGCTGCTGG TCCTGCACTA
GGTCTCCTTG TGGGATCCTA TATAGTCCAG GACTTGGGGT GGCCGTACGC CTTTCACACG
GCTTTCATCC TCTCCTTGAT TTTGCTGGGC ATCTCGGCCA AGTACATCGT GGAAATCCCT
GAGAAGACTA GGGAAAAGAT TGACTACCTT GGTGCTACCT TCCTCATGTT AACAGTGGTG
CCACTCCTAG TTTATCTTTC CAATGGGCCC AACGTGGGGT GGACCACCTT GAGCCAGATA
GCCCTCATCG TGGTGTCAGT GGTAGCGTTC CCTATCTTCT TGATCGTGGA GAGGAGAACC
TCGGAGCCCT TGATGAGGCT TGACCTCTTT AGGGTAAGGA ACCTCATGGT GGCAAACGTG
GCTGGTCTCA TTTCCGGTAC GGGTATGTTC CTGATGTTCA CTGGATTGGT TTACTACCTT
CAGCTACCCA GACCCTACGG ACTAGGTTTA ACTATTATCG AGTCAGGTCT CCTCATGGCA
CCCGTTGCCC TGGTCATGAT GACCTTGGGT CCTATTGTGG GTAGAGCTAT AAATGTGATT
GGCCCGAAAC CTCTGCTCGT CGTAGGATCA TCGGTCAGCA TGTTGGGCTA CTTCCTACTG
GACACCTTTA GGTATAGCGA GTACGAGGTT CTATTTGACG TGATAGTGAC AGCTGCAGGA
TTGGTTAACC TGATTATCCC CCTAGTTAAC ATGGTCGCCT TGGCTTTACC TGAGGAGCAA
AGGGGAATAG GGATCGGAAT GAACACCTTG ATAAGGACCA TAGGAAGCGC AATCGGTCCA
GTGATATCAA CAGTGTTCAT GGACACTTAT GTCACGTGGT TGCTATATGA CGTTAATGGA
CAGTTCATTC CCGTGGCACA GGTACCTGAC TACTCGGCCT TCCACTACAT GTACATGGTA
GCAATTGCCC TTATGTTCCT GAGTTTGATA GCCTCATTGT TCACGAAAAA CTATGTTATA
AAGGCCAGAC AGGAGGTGAA AAGGGAAGTA GTTGAGGCCA AACATCCTGG ATGA
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| Protein sequence | MRTLLSLTLM LMLVNYVETM VIPALPKIED QFSTTATTVA WVTSAYLIVG AVASPIFGKL
GDRYGKKKVY LISIGFYSLA VLMAGFSPNI YFLIFSRGVQ GIGYSTFPLA IAIITDLFPK
ERVAWAQGIL SATLAAGPAL GLLVGSYIVQ DLGWPYAFHT AFILSLILLG ISAKYIVEIP
EKTREKIDYL GATFLMLTVV PLLVYLSNGP NVGWTTLSQI ALIVVSVVAF PIFLIVERRT
SEPLMRLDLF RVRNLMVANV AGLISGTGMF LMFTGLVYYL QLPRPYGLGL TIIESGLLMA
PVALVMMTLG PIVGRAINVI GPKPLLVVGS SVSMLGYFLL DTFRYSEYEV LFDVIVTAAG
LVNLIIPLVN MVALALPEEQ RGIGIGMNTL IRTIGSAIGP VISTVFMDTY VTWLLYDVNG
QFIPVAQVPD YSAFHYMYMV AIALMFLSLI ASLFTKNYVI KARQEVKREV VEAKHPG
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