Gene Msed_1083 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMsed_1083 
Symbol 
ID5104464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMetallosphaera sedula DSM 5348 
KingdomArchaea 
Replicon accessionNC_009440 
Strand
Start bp1010999 
End bp1011550 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content47% 
IMG OID640506978 
Producthypothetical protein 
Protein accessionYP_001191171 
Protein GI146303855 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGGAT TCGGAAGAAA GAAGGACAAG AAGAAACAGG ACGTAAGCAA TGAGGATACT 
CGGCCAGTGG AAATAGAGAA TAGTGGACCT GCATACTCAC CATTTGCTGA CTTCGATGAG
ATCTTCAATC AGTTTCTCAA GATGCAAGAG GAAATGCTTA AACAGCTCAT GGAAAACGGC
GAGGTTAGGA CCTATACCAG GAGAGTGACC GTTGGCCCCG ATGGTCAACC AAGGGTAGAG
GAGTACGTTA ACGGCGTTCC AGTTTCTGAG CTTAAGGAGA AGGACGTGGA GCCTCCAGAG
GGAGATTATG AGGTCGTGGA GAGCGGTGAT AAGGTCATTG TTACCATGGA AATCCCAGGA
GTGAAGAAGG AGGACATCCA GGTGTCTCTC AAGAATAAGG TTAAGTTGCT GGTTGAGTGG
AACGGGAAAA AGAAGGAAAT ATCACTTCCA GGACCAGTGG AACCGGTGTC GGTTAAGCTC
AACAATGGTG TTCTAGTCTG CACCTTCAGA AAGGCATACA CGGATAAGGT TGATAAGCTT
CGGATAGAGT GA
 
Protein sequence
MFGFGRKKDK KKQDVSNEDT RPVEIENSGP AYSPFADFDE IFNQFLKMQE EMLKQLMENG 
EVRTYTRRVT VGPDGQPRVE EYVNGVPVSE LKEKDVEPPE GDYEVVESGD KVIVTMEIPG
VKKEDIQVSL KNKVKLLVEW NGKKKEISLP GPVEPVSVKL NNGVLVCTFR KAYTDKVDKL
RIE