Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Msed_1083 |
Symbol | |
ID | 5104464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Metallosphaera sedula DSM 5348 |
Kingdom | Archaea |
Replicon accession | NC_009440 |
Strand | - |
Start bp | 1010999 |
End bp | 1011550 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640506978 |
Product | hypothetical protein |
Protein accession | YP_001191171 |
Protein GI | 146303855 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGGAT TCGGAAGAAA GAAGGACAAG AAGAAACAGG ACGTAAGCAA TGAGGATACT CGGCCAGTGG AAATAGAGAA TAGTGGACCT GCATACTCAC CATTTGCTGA CTTCGATGAG ATCTTCAATC AGTTTCTCAA GATGCAAGAG GAAATGCTTA AACAGCTCAT GGAAAACGGC GAGGTTAGGA CCTATACCAG GAGAGTGACC GTTGGCCCCG ATGGTCAACC AAGGGTAGAG GAGTACGTTA ACGGCGTTCC AGTTTCTGAG CTTAAGGAGA AGGACGTGGA GCCTCCAGAG GGAGATTATG AGGTCGTGGA GAGCGGTGAT AAGGTCATTG TTACCATGGA AATCCCAGGA GTGAAGAAGG AGGACATCCA GGTGTCTCTC AAGAATAAGG TTAAGTTGCT GGTTGAGTGG AACGGGAAAA AGAAGGAAAT ATCACTTCCA GGACCAGTGG AACCGGTGTC GGTTAAGCTC AACAATGGTG TTCTAGTCTG CACCTTCAGA AAGGCATACA CGGATAAGGT TGATAAGCTT CGGATAGAGT GA
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Protein sequence | MFGFGRKKDK KKQDVSNEDT RPVEIENSGP AYSPFADFDE IFNQFLKMQE EMLKQLMENG EVRTYTRRVT VGPDGQPRVE EYVNGVPVSE LKEKDVEPPE GDYEVVESGD KVIVTMEIPG VKKEDIQVSL KNKVKLLVEW NGKKKEISLP GPVEPVSVKL NNGVLVCTFR KAYTDKVDKL RIE
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