| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Msed_1059 |
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| Symbol | |
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| ID | 5104441 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Metallosphaera sedula DSM 5348 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009440 |
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| Strand | + |
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| Start bp | 988263 |
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| End bp | 989237 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640506955 |
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| Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
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| Protein accession | YP_001191148 |
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| Protein GI | 146303832 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCAG TTGTTGGTAT AGATTCCTCG GTTATAGTTG AGGAACTAGA CCAGGAAAAG
GTTAGGGAGT TAAATTCGTT AGCAGAAATT GTATACTTCA ATCCATACGC TCCAGAGGAT
CAGATAGTCT CCCTTCTAAG GGACGCTATT GCCATAGTTG ACCGAAAGGC TAAGATATCG
TCGAAGATAA TTAGGGAACT TAGAAACTTG AAACTCATAG CTAGGACTGG TGCAGGAGTT
GATGAAACTA GGGTTGACCT CAAGGCAGCT AAGGAAAGGG ATATCATCAT TACCTATAAC
CCTGGAGGAA ATTCGGTCGC CGTCGCTGAA CTTACTATTA TGCTGGCAAT TGCACTTTAT
AGGAAAGTAA TTCCACTTGC CTTGTCTGTG AAAGCAGGAA AGTGGAGTGA GCTTAAGCCT
AAGGACACCA TGGGACATGA ATTGGAGGGA AAGGCCTGGG GAATCCTGGG GTTTGGGAAC
ATAGGGAAAA GGGTTGCACA ACTTGTCACT TCACTCAACT GCAAGGTACT GGGATATGAT
CCATACGTGT CATCGGAGAT AATGGAGAAA CACGGGGTCA AGTCACTCTC ACTGGAGGAA
CTTCTATCAA AGTCAGATAT AATCTCAATC CATGTACCAT TAACTGAATC CACCAGGCAT
CTTATCAACA GCGAAAGATT GAAAACCATG AAAAAGACCG CCATCCTAAT AAACGTTAGT
AGAGGGGGAA TAATTGACGA TAAGGCATTA TATGAGTCCC TCAGGAATGG GGAAATAGCG
GGGGCAGCCC TCGATACGCC TGAGGAGGAG CCAGTTAAAG TAGACAATCC ATTGCTCTCC
CTAGATAACG TGATTATTAC TCCCCATATT GGAGGTTCAA CCTTTGAGGC TTCAATAAAG
AACGCTAATT CTGCAGTAGA AGAAGTTATT AGGTTCTTAA AGGGACTGCC TCCCCTGGTC
CCCTTTAGGT ATTAG
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| Protein sequence | MKPVVGIDSS VIVEELDQEK VRELNSLAEI VYFNPYAPED QIVSLLRDAI AIVDRKAKIS
SKIIRELRNL KLIARTGAGV DETRVDLKAA KERDIIITYN PGGNSVAVAE LTIMLAIALY
RKVIPLALSV KAGKWSELKP KDTMGHELEG KAWGILGFGN IGKRVAQLVT SLNCKVLGYD
PYVSSEIMEK HGVKSLSLEE LLSKSDIISI HVPLTESTRH LINSERLKTM KKTAILINVS
RGGIIDDKAL YESLRNGEIA GAALDTPEEE PVKVDNPLLS LDNVIITPHI GGSTFEASIK
NANSAVEEVI RFLKGLPPLV PFRY
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